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IVF0011107 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011107
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:11845224..11845403
RNA-Seq ExpressionIVF0011107
SyntenyIVF0011107
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035362.1 retrotransposon protein [Cucumis melo var. makuwa]2.61e-2898.28Show/hide
Query:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
        EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLHEELLKKP
Subjt:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
KAA0035627.1 retrotransposon protein [Cucumis melo var. makuwa]4.56e-2796.55Show/hide
Query:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
        +VVDVEEMVAMFLHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLHEELLKKP
Subjt:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
KAA0046717.1 retrotransposon protein [Cucumis melo var. makuwa]1.45e-2898.28Show/hide
Query:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
        EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLHEELLKKP
Subjt:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
KAA0052283.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.11e-2898.28Show/hide
Query:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
        EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLHEELLKKP
Subjt:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
KAA0057637.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.70e-2894.83Show/hide
Query:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
        EVVDVEEM+AMFLHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLH+ELLKKP
Subjt:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
TrEMBL top hitse value%identityAlignment
A0A5A7SVT3 Retrotransposon protein3.1e-2198.28Show/hide
Query:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
        EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLHEELLKKP
Subjt:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
A0A5A7U476 Retrotransposon protein3.1e-2198.28Show/hide
Query:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
        EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLHEELLKKP
Subjt:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
A0A5A7U8N7 Putative nuclease HARBI13.1e-2198.28Show/hide
Query:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
        EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLHEELLKKP
Subjt:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
A0A5A7VG29 Retrotransposon protein3.1e-2198.28Show/hide
Query:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
        EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLHEELLKKP
Subjt:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
A0A5D3BDX0 Retrotransposon protein3.1e-2198.28Show/hide
Query:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
        EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLHEELLKKP
Subjt:  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.8e-0642.59Show/hide
Query:  VDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLK
        + +E  +A+FL I+ H+++ R +Q  F  SGE ISRHFN VL AVI + ++  +
Subjt:  VDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGCGCACGATGTGAAAAATCGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGATAAT
TTCCCGCCATTTCAACATGGTCTTGTTGGCTGTCATTCGACTTCATGAGGAGCTTTTGAAAAAACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGCGCACGATGTGAAAAATCGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGATAAT
TTCCCGCCATTTCAACATGGTCTTGTTGGCTGTCATTCGACTTCATGAGGAGCTTTTGAAAAAACCATAA
Protein sequenceShow/hide protein sequence
MEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHEELLKKP