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IVF0011121 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011121
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr11:3089564..3090080
RNA-Seq ExpressionIVF0011121
SyntenyIVF0011121
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651931.1 hypothetical protein Csa_006531, partial [Cucumis sativus]1.02e-6191.59Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQDRDFQEKASDE-IYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGHENLGENKSFRKRSR
        MDDKSLPYNLRLRKDHKSSSPTEHSK HK DRDFQEKASD+ IYVSHLIVDYRC+KCGCSFDIESSLSSHHCKNKNEREAMEIEGH  LGENKSFRK+SR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQDRDFQEKASDE-IYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGHENLGENKSFRKRSR

Query:  KGIPRRA
        KG+PRRA
Subjt:  KGIPRRA

KAG6571418.1 hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]8.28e-3663.96Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHENLGENKSFRKR
        MDDKS+PYNLRLRKDHK+S+ TE SK  KQ +R+FQEK  +E+        Y CDKCGCSFD++ SL SHHCKN N  E+EAME E  E LG++KS RKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHENLGENKSFRKR

Query:  SRKGIPRRAPF
        +RKGIP RAPF
Subjt:  SRKGIPRRAPF

KAG7011182.1 hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]3.36e-3563.06Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHENLGENKSFRKR
        MD+KS+PYNLRLRKDHK+S+ TE SK  KQ +R+FQEK  +E+        Y CDKCGCSFD++ SL SHHCKN N  E+EAME E  E LG++KS RKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHENLGENKSFRKR

Query:  SRKGIPRRAPF
        +RKGIP RAPF
Subjt:  SRKGIPRRAPF

XP_022928048.1 uncharacterized protein LOC111434950 [Cucurbita moschata]2.37e-3563.39Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHENLGENKSFRKR
        MD+KS+PYNLRLRKDHK+S+ TE SK  KQ +R+FQEK  +E+        Y CDKCGCSFD++ SL SHHCK  NK+EREA E E  E LG++KS RKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHENLGENKSFRKR

Query:  SRKGIPRRAPFF
        +RKGIP RAPFF
Subjt:  SRKGIPRRAPFF

XP_023511836.1 uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]1.43e-3664.29Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHENLGENKSFRKR
        MDDKS+PYNLRLRKDHK+S+ TE SK  KQ +R+FQEK  +E+        Y CDKCGCSFD++ SL SHHCKN N  E+EAME E  E LG++KS RKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKN--EREAMEIEGHENLGENKSFRKR

Query:  SRKGIPRRAPFF
        +RKGIP RAPFF
Subjt:  SRKGIPRRAPFF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ06 C2H2-type domain-containing protein4.9e-4991.82Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQDRDFQEKAS-DEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGHENLGENKSFRKRSR
        MDDKSLPYNLRLRKDHKSSSPTEHSK HK DRDFQEKAS D+IYVSHLIVDYRC+KCGCSFDIESSLSSHHCKNKNEREAMEIEGH  LGENKSFRK+SR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQDRDFQEKAS-DEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGHENLGENKSFRKRSR

Query:  KGIPRRAPFF
        KG+PRRAPFF
Subjt:  KGIPRRAPFF

A0A6J1D739 uncharacterized protein LOC1110179591.4e-1955.56Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAH-KQDRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGH-------ENLGENK
        MDDKSLPYNLRLR   K+S+PTE SK + K +RDFQEK  +EI      ++ RC+KCGC F IE SL SHHCK KN+     +E         +N    K
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAH-KQDRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGH-------ENLGENK

Query:  SFRKRSRKGIPRRAPFF
        SFRKRSRKGIP RAP F
Subjt:  SFRKRSRKGIPRRAPFF

A0A6J1EMR9 uncharacterized protein LOC1114349509.1e-2763.39Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHENLGENKSFRKR
        MD+KS+PYNLRLRKDHK+S+ TE SK  KQ +R+FQEK  +E+     +  Y CDKCGCSFD++ SL SHHCK  NK+EREA E E  E LG++KS RKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHENLGENKSFRKR

Query:  SRKGIPRRAPFF
        +RKGIP RAPFF
Subjt:  SRKGIPRRAPFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACAAATCTCTTCCTTATAATCTTCGACTTAGGAAAGATCACAAGTCTTCTTCTCCAACAGAACATTCCAAAGCTCATAAACAAGACAGAGACTTTCAGGAAAA
GGCAAGTGATGAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGATAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGTTCACACCATTGTAAAAATA
AAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGAAAATTTGGGAGAGAACAAATCATTCAGAAAAAGAAGCAGGAAGGGGATACCAAGAAGAGCACCTTTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGACAAATCTCTTCCTTATAATCTTCGACTTAGGAAAGATCACAAGTCTTCTTCTCCAACAGAACATTCCAAAGCTCATAAACAAGACAGAGACTTTCAGGAAAA
GGCAAGTGATGAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGATAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGTTCACACCATTGTAAAAATA
AAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGAAAATTTGGGAGAGAACAAATCATTCAGAAAAAGAAGCAGGAAGGGGATACCAAGAAGAGCACCTTTCTTTTAG
Protein sequenceShow/hide protein sequence
MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQDRDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGHENLGENKSFRKRSRKGIPRRAPFF