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IVF0011141 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011141
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr11:13620169..13620465
RNA-Seq ExpressionIVF0011141
SyntenyIVF0011141
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054399.1 hypothetical protein E6C27_scaffold24G001450 [Cucumis melo var. makuwa]4.69e-1755.1Show/hide
Query:  MGGKVNLVGLSYISSLHQNKEEER----------------LEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRKRIKLKNKRVLKEDSTAQSNFQ
        M G+VNL GLS ISSLHQNKEEER                +EK PP  S      TSRIEVDATK+   D  PL+RKRIKLKNKR+++E+S  QSN Q
Subjt:  MGGKVNLVGLSYISSLHQNKEEER----------------LEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRKRIKLKNKRVLKEDSTAQSNFQ

KAA0065577.1 hypothetical protein E6C27_scaffold90G00150 [Cucumis melo var. makuwa]1.63e-2458.16Show/hide
Query:  MGGKVNLVGLSYISSLHQNKEEER----------------LEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRKRIKLKNKRVLKEDSTAQSNFQ
        MGG+VNL GLSYI +LH+NKEEER                +EK  P P LK K  TS++EVDA K+S+ D DP RRKRIKLKNK+VLKEDS  QSN Q
Subjt:  MGGKVNLVGLSYISSLHQNKEEER----------------LEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRKRIKLKNKRVLKEDSTAQSNFQ

TYK01096.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]2.66e-1283.33Show/hide
Query:  KEEERLEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRK
        +E + +EKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPL+ K
Subjt:  KEEERLEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRK

TrEMBL top hitse value%identityAlignment
A0A5A7ULS0 Uncharacterized protein1.5e-1355.1Show/hide
Query:  MGGKVNLVGLSYISSLHQNKEEER----------------LEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRKRIKLKNKRVLKEDSTAQSNFQ
        M G+VNL GLS ISSLHQNKEEER                +EK PP        STSRIEVDATK+   D  PL+RKRIKLKNKR+++E+S  QSN Q
Subjt:  MGGKVNLVGLSYISSLHQNKEEER----------------LEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRKRIKLKNKRVLKEDSTAQSNFQ

A0A5D3BS70 Retrovirus-related Pol polyprotein from transposon 17.62.2e-0983.33Show/hide
Query:  KEEERLEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRK
        +E + +EKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPL+ K
Subjt:  KEEERLEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRK

A0A5D3C5C7 Uncharacterized protein9.9e-1858.16Show/hide
Query:  MGGKVNLVGLSYISSLHQNKEEER----------------LEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRKRIKLKNKRVLKEDSTAQSNFQ
        MGG+VNL GLSYI +LH+NKEEER                +EK  P P LK K  TS++EVDA K+S+ D DP RRKRIKLKNK+VLKEDS  QSN Q
Subjt:  MGGKVNLVGLSYISSLHQNKEEER----------------LEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRKRIKLKNKRVLKEDSTAQSNFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGGAAAGTCAACTTGGTAGGACTTAGCTACATAAGTAGCCTCCACCAAAATAAGGAGGAAGAGAGGCTTGAGAAGTTTCCACCTCTACCATCGCTTAAACGCAA
AGGGTCAACCTCAAGGATAGAGGTTGATGCGACAAAGAAAAGCCTACCTGATTCTGACCCTCTGCGTAGAAAGAGAATAAAACTCAAGAACAAAAGGGTCTTAAAAGAGG
ACTCCACAGCCCAATCCAACTTCCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGGAAAGTCAACTTGGTAGGACTTAGCTACATAAGTAGCCTCCACCAAAATAAGGAGGAAGAGAGGCTTGAGAAGTTTCCACCTCTACCATCGCTTAAACGCAA
AGGGTCAACCTCAAGGATAGAGGTTGATGCGACAAAGAAAAGCCTACCTGATTCTGACCCTCTGCGTAGAAAGAGAATAAAACTCAAGAACAAAAGGGTCTTAAAAGAGG
ACTCCACAGCCCAATCCAACTTCCAGTAA
Protein sequenceShow/hide protein sequence
MGGKVNLVGLSYISSLHQNKEEERLEKFPPLPSLKRKGSTSRIEVDATKKSLPDSDPLRRKRIKLKNKRVLKEDSTAQSNFQ