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IVF0011143 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011143
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationtig00195367:135023..135232
RNA-Seq ExpressionIVF0011143
SyntenyIVF0011143
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050651.1 uncharacterized protein E6C27_scaffold673G001250 [Cucumis melo var. makuwa]7.57e-1590.7Show/hide
Query:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVMANKEDEE
        KA S+REKAQQKHDR FDF EQGGRREGSCERFRVMANKEDEE
Subjt:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVMANKEDEE
TrEMBL top hitse value%identityAlignment
A0A5D3C784 Integrase catalytic domain-containing protein2.0e-1176.36Show/hide
Query:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVMANKEDEEDLIFVNKEDKQK
        KA S+REKAQQKHDR FDF EQGGRREGSCERFRVMANKEDEE      KED+ +
Subjt:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVMANKEDEEDLIFVNKEDKQK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGACGAAATCTTGGAAGGCGACTTCATTGCGAGAGAAGGCTCAGCAGAAACACGACAGAGGATTTGATTTTCGCGAACAAGGAGGACGAAGAGAAGGTTCGTG
CGAGAGATTTAGGGTGATGGCGAACAAGGAAGACGAAGAGGATTTGATTTTTGTGAACAAGGAGGACAAACAGAAGGTTCGTGCGAGAGATTTAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGACGAAATCTTGGAAGGCGACTTCATTGCGAGAGAAGGCTCAGCAGAAACACGACAGAGGATTTGATTTTCGCGAACAAGGAGGACGAAGAGAAGGTTCGTG
CGAGAGATTTAGGGTGATGGCGAACAAGGAAGACGAAGAGGATTTGATTTTTGTGAACAAGGAGGACAAACAGAAGGTTCGTGCGAGAGATTTAGGGTGA
Protein sequenceShow/hide protein sequence
MGKTKSWKATSLREKAQQKHDRGFDFREQGGRREGSCERFRVMANKEDEEDLIFVNKEDKQKVRARDLG