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IVF0011190 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011190
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr10:23850833..23851216
RNA-Seq ExpressionIVF0011190
SyntenyIVF0011190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032477.1 uncharacterized protein E6C27_scaffold500G00010 [Cucumis melo var. makuwa]5.98e-3557.6Show/hide
Query:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA
        MHG+RM GR FKSTPTRRPY  PSKKIQVN S S  LSMH E ++ SAA++VE    V +++IS+MD D  DDVPLARLL+K L S VEP+     VT  
Subjt:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA

Query:  HFHESASSEDIVVPTPGQPSTTNED
        H HES+S E+I++PT G P   N++
Subjt:  HFHESASSEDIVVPTPGQPSTTNED

KAA0056463.1 uncharacterized protein E6C27_scaffold186G002350 [Cucumis melo var. makuwa]3.83e-3963.11Show/hide
Query:  MMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLAHFHES
        M  RRFKSTPTRRPYR PS+K QVN S S  LS+ DE I  SA E+VE+   V +++IS+MD DE DDV LARLLKK LFS V+P +ADVP+T AH  ES
Subjt:  MMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLAHFHES

Query:  ASSEDIVVPTPGQPSTTNEDIG
        +SSEDI VPT G+PS  NE++G
Subjt:  ASSEDIVVPTPGQPSTTNEDIG

KAA0062802.1 uncharacterized protein E6C27_scaffold357G00190 [Cucumis melo var. makuwa]7.78e-4460.63Show/hide
Query:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA
        MHG+++  RRFKSTPTRRPYR P KK QVN S S  +SMH+E I++S  E+VE+ + V+++ +S+MDSDE  +VPLARLL K LFS VEP+IADVP+T A
Subjt:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA

Query:  HFHESASSEDIVVPTPGQPSTTNEDIG
        + +ES+SSEDI VPTPG  S TN+++G
Subjt:  HFHESASSEDIVVPTPGQPSTTNEDIG

KAA0065426.1 uncharacterized protein E6C27_scaffold17G001030 [Cucumis melo var. makuwa]2.58e-82100Show/hide
Query:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA
        MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA
Subjt:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA

Query:  HFHESASSEDIVVPTPGQPSTTNEDIG
        HFHESASSEDIVVPTPGQPSTTNEDIG
Subjt:  HFHESASSEDIVVPTPGQPSTTNEDIG

KAA0066660.1 uncharacterized protein E6C27_scaffold979G00920 [Cucumis melo var. makuwa]2.42e-4262.2Show/hide
Query:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA
        MH +RM G RFKSTP+RR YR PS+K QVN SNSP LS+HD+ +   AAENVE   VVSK+++S+MDSDE DDVPLARLLKK LF  V   +AD  ++L 
Subjt:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA

Query:  HFHESASSEDIVVPTPGQPSTTNEDIG
        H   S+SSEDI VPT  QPSTT++D G
Subjt:  HFHESASSEDIVVPTPGQPSTTNEDIG

TrEMBL top hitse value%identityAlignment
A0A5A7U0B3 Envelope-like protein9.5e-2858.54Show/hide
Query:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA
        MHG+R+  R F+STPTRRPY  PS+K QVN  + P LSMHD+  +  A ENV+ +SVV ++++SKMDSDE DDVPLARLLKK LFS  E T+AD P+T  
Subjt:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA

Query:  HFHESASSEDIVVPTPGQPSTTN
        +  +S+SS+DI VPTP   ST N
Subjt:  HFHESASSEDIVVPTPGQPSTTN

A0A5A7UKN9 Uncharacterized protein1.7e-2963.11Show/hide
Query:  MMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLAHFHES
        M  RRFKSTPTRRPYR PS+K QVN S S  LS+ DE I  SA E+VE+   V +++IS+MD DE DDV LARLLKK LFS V+P +ADVP+T AH  ES
Subjt:  MMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLAHFHES

Query:  ASSEDIVVPTPGQPSTTNEDIG
        +SSEDI VPT G+PS  NE++G
Subjt:  ASSEDIVVPTPGQPSTTNEDIG

A0A5A7V3I5 Uncharacterized protein4.4e-3360.63Show/hide
Query:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA
        MHG+++  RRFKSTPTRRPYR P KK QVN S S  +SMH+E I++S  E+VE+ + V+++ +S+MDSDE  +VPLARLL K LFS VEP+IADVP+T A
Subjt:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA

Query:  HFHESASSEDIVVPTPGQPSTTNEDIG
        + +ES+SSEDI VPTPG  S TN+++G
Subjt:  HFHESASSEDIVVPTPGQPSTTNEDIG

A0A5A7VGH3 Uncharacterized protein1.3e-61100Show/hide
Query:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA
        MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA
Subjt:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA

Query:  HFHESASSEDIVVPTPGQPSTTNEDIG
        HFHESASSEDIVVPTPGQPSTTNEDIG
Subjt:  HFHESASSEDIVVPTPGQPSTTNEDIG

A0A5D3BWJ2 Uncharacterized protein1.4e-3162.2Show/hide
Query:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA
        MH +RM G RFKSTP+RR YR PS+K QVN SNSP LS+HD+ +   AAENVE   VVSK+++S+MDSDE DDVPLARLLKK LF  V   +AD  ++L 
Subjt:  MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLA

Query:  HFHESASSEDIVVPTPGQPSTTNEDIG
        H   S+SSEDI VPT  QPSTT++D G
Subjt:  HFHESASSEDIVVPTPGQPSTTNEDIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGGTATTCGAATGATGGGTCGTCGATTCAAAAGCACTCCCACTCGAAGACCTTATCGACCGCCATCGAAAAAGATTCAGGTAAATACTTCTAATAGTCCTCTTTT
ATCTATGCATGATGAGCAAATTTCTAGTAGTGCTGCTGAGAATGTCGAAGTTGATTCGGTTGTATCGAAGACTTATATCTCTAAGATGGATTCGGATGAAGGAGATGATG
TTCCCCTAGCCAGGTTATTGAAGAAGAGTTTATTTTCAACTGTTGAGCCCACTATAGCAGATGTTCCTGTCACTTTGGCTCACTTTCACGAAAGTGCTTCTTCTGAAGAC
ATAGTTGTACCAACGCCTGGTCAGCCTTCTACTACAAATGAAGACATTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATGGTATTCGAATGATGGGTCGTCGATTCAAAAGCACTCCCACTCGAAGACCTTATCGACCGCCATCGAAAAAGATTCAGGTAAATACTTCTAATAGTCCTCTTTT
ATCTATGCATGATGAGCAAATTTCTAGTAGTGCTGCTGAGAATGTCGAAGTTGATTCGGTTGTATCGAAGACTTATATCTCTAAGATGGATTCGGATGAAGGAGATGATG
TTCCCCTAGCCAGGTTATTGAAGAAGAGTTTATTTTCAACTGTTGAGCCCACTATAGCAGATGTTCCTGTCACTTTGGCTCACTTTCACGAAAGTGCTTCTTCTGAAGAC
ATAGTTGTACCAACGCCTGGTCAGCCTTCTACTACAAATGAAGACATTGGTTAA
Protein sequenceShow/hide protein sequence
MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSKTYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLAHFHESASSED
IVVPTPGQPSTTNEDIG