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IVF0011193 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011193
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:10130288..10130455
RNA-Seq ExpressionIVF0011193
SyntenyIVF0011193
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046501.1 retrotransposon protein [Cucumis melo var. makuwa]1.25e-28100Show/hide
Query:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLR
        MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLR
Subjt:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLR
KAA0049604.1 retrotransposon protein [Cucumis melo var. makuwa]1.06e-2280Show/hide
Query:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
        MTNCDDIDEV+E DS YATTTATEDIQ+I+T  EWSNW D+LA+AMF EWQLRNA
Subjt:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]2.29e-2380Show/hide
Query:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
        MT CDDID+V+E DSAYATTTA+EDI YI+TT EWS WRDELAE+MFT+WQLRNA
Subjt:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]5.37e-2278.18Show/hide
Query:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
        MT CDDID+ +E DS YATTTA+EDIQYI+TT EWS WRD+LAE+MFTEWQLRNA
Subjt:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
TYJ97711.1 retrotransposon protein [Cucumis melo var. makuwa]1.85e-31100Show/hide
Query:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
        MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
Subjt:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7TYT9 Retrotransposon protein1.3e-21100Show/hide
Query:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLR
        MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLR
Subjt:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLR
A0A5A7U2Y8 Retrotransposon protein3.6e-1680Show/hide
Query:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
        MTNCDDIDEV+E DS YATTTATEDIQ+I+T  EWSNW D+LA+AMF EWQLRNA
Subjt:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
A0A5A7V4Q8 Retrotransposon protein4.7e-1678.18Show/hide
Query:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
        MT CDDID+ +E DS YATTTA+EDIQYI+TT EWS WRD+LAE+MFTEWQLRNA
Subjt:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
A0A5D3BDZ0 Retrotransposon protein1.2e-1680Show/hide
Query:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
        MT CDDID+V+E DSAYATTTA+EDI YI+TT EWS WRDELAE+MFT+WQLRNA
Subjt:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
A0A5D3BGE3 Retrotransposon protein8.9e-23100Show/hide
Query:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
        MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
Subjt:  MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATTGTGACGACATTGACGAAGTTAACGAGAGGGACTCCGCATACGCCACCACCACCGCTACAGAAGATATTCAGTACATTGACACGACAACCGAGTGGTCTAA
CTGGCGCGACGAATTAGCTGAAGCAATGTTCACAGAATGGCAGTTGCGTAATGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAATTGTGACGACATTGACGAAGTTAACGAGAGGGACTCCGCATACGCCACCACCACCGCTACAGAAGATATTCAGTACATTGACACGACAACCGAGTGGTCTAA
CTGGCGCGACGAATTAGCTGAAGCAATGTTCACAGAATGGCAGTTGCGTAATGCTTAA
Protein sequenceShow/hide protein sequence
MTNCDDIDEVNERDSAYATTTATEDIQYIDTTTEWSNWRDELAEAMFTEWQLRNA