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IVF0011196 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011196
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr06:7761824..7762264
RNA-Seq ExpressionIVF0011196
SyntenyIVF0011196
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]2.79e-3349.64Show/hide
Query:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE----
        MKKFF  I+N RR QDL +F+ R++EN+++AWS  KR+VK+CLH+G  KC+LME            T DVVFVGG+L++SYNQ KT LD++ +N +    
Subjt:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE----

Query:  ------------REKIKDGIDRNAMVTLQGQLTVMNKLL
                    R +  +G+DRNAMVTLQGQ+T MNKLL
Subjt:  ------------REKIKDGIDRNAMVTLQGQLTVMNKLL

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]4.09e-2141.48Show/hide
Query:  MLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE-------------------RE
        M F+QR++EN+ + W +FKRM+K C H+  P+C+LME            ++++VF GGML+SSYNQIK  LD++ +N +                   R 
Subjt:  MLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE-------------------RE

Query:  KIKDGIDRNAMVTLQGQLTVMNKLLQSMTLMPVDV
        +I+DGID + MV LQGQ+  MN +LQSM L+ V+V
Subjt:  KIKDGIDRNAMVTLQGQLTVMNKLLQSMTLMPVDV

KAA0059690.1 Retrotransposon gag protein [Cucumis melo var. makuwa]5.82e-2053.12Show/hide
Query:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE
        +KKFF  IKN RR QD MLFKQR  EN+H+AWS+FKR++K CL  G P+ +LME            T   VF GGMLKS YNQIK+ L+S+  N +
Subjt:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE

KAA0061983.1 uncharacterized protein E6C27_scaffold89G002850 [Cucumis melo var. makuwa]5.31e-2455.21Show/hide
Query:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE
        MKKFFP+IK  +R QDL+LFKQR+++N+H+AWS FKRMVK+CLH+G  K +LME            ++D +F+GG+L+SSYNQIK  LDS+ NN +
Subjt:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]2.49e-3049.21Show/hide
Query:  MLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILMETS------------DVVFVGGMLKSSYNQIKTTLDSITNN-----------REREKIKDGIDR
        M+FKQR+KENMH+ WS+FKR+VK+C  +G P+C+ ME              + +FVGGML+SSYNQIK TLDS++NN           R R + K+G+D+
Subjt:  MLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILMETS------------DVVFVGGMLKSSYNQIKTTLDSITNN-----------REREKIKDGIDR

Query:  NAMVTLQGQLTVMNKLLQSMTLMPVD
        + +V LQGQ+  MN LLQSMTL  V+
Subjt:  NAMVTLQGQLTVMNKLLQSMTLMPVD

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein1.2e-2249.21Show/hide
Query:  MLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILMET------------SDVVFVGGMLKSSYNQIKTTLDSITNN-----------REREKIKDGIDR
        M+FKQR+KENMH+ WS+FKR+VK+C  +G P+C+ ME              + +FVGGML+SSYNQIK TLDS++NN           R R + K+G+D+
Subjt:  MLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILMET------------SDVVFVGGMLKSSYNQIKTTLDSITNN-----------REREKIKDGIDR

Query:  NAMVTLQGQLTVMNKLLQSMTLMPVD
        + +V LQGQ+  MN LLQSMTL  V+
Subjt:  NAMVTLQGQLTVMNKLLQSMTLMPVD

A0A5A7TUE1 Uncharacterized protein5.5e-2549.64Show/hide
Query:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE----
        MKKFF  I+N RR QDL +F+ R++EN+++AWS  KR+VK+CLH+G  KC+LME            T DVVFVGG+L++SYNQ KT LD++ +N +    
Subjt:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE----

Query:  ------------REKIKDGIDRNAMVTLQGQLTVMNKLL
                    R +  +G+DRNAMVTLQGQ+T MNKLL
Subjt:  ------------REKIKDGIDRNAMVTLQGQLTVMNKLL

A0A5A7V1F3 Retrotrans_gag domain-containing protein4.1e-2055.21Show/hide
Query:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE
        MKKFFP+IK  +R QDL+LFKQR+++N+H+AWS FKRMVK+CLH+G  K +LME            ++D +F+GG+L+SSYNQIK  LDS+ NN +
Subjt:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE

A0A5D3CC26 Uncharacterized protein5.5e-1741.48Show/hide
Query:  MLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE-------------------RE
        M F+QR++EN+ + W +FKRM+K C H+  P+C+LME            ++++VF GGML+SSYNQIK  LD++ +N +                   R 
Subjt:  MLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE-------------------RE

Query:  KIKDGIDRNAMVTLQGQLTVMNKLLQSMTLMPVDV
        +I+DGID + MV LQGQ+  MN +LQSM L+ V+V
Subjt:  KIKDGIDRNAMVTLQGQLTVMNKLLQSMTLMPVDV

A0A5D3DR17 Retrotransposon gag protein4.7e-1653.12Show/hide
Query:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE
        +KKFF  IKN RR QD MLFKQR  EN+H+AWS+FKR++K CL  G P+ +LME            T   VF GGMLKS YNQIK+ L+S+  N +
Subjt:  MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILME------------TSDVVFVGGMLKSSYNQIKTTLDSITNNRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATTCTTCCCGTCTATCAAAAATGAGAGAAGAGAGCAGGACCTAATGCTTTTCAAGCAAAGAAATAAAGAAAATATGCACGAAGCGTGGAGTAAATTTAAACG
AATGGTGAAGTCATGCCTCCACAATGGCACACCTAAATGTATCTTGATGGAGACTTCTGATGTTGTGTTTGTAGGAGGGATGTTGAAGAGTTCATACAACCAGATAAAGA
CAACGCTAGACTCTATAACCAACAATAGAGAAAGAGAAAAAATTAAAGATGGAATAGATAGAAATGCAATGGTGACATTGCAAGGACAATTAACTGTAATGAACAAATTG
TTGCAATCAATGACTTTAATGCCAGTTGATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATTCTTCCCGTCTATCAAAAATGAGAGAAGAGAGCAGGACCTAATGCTTTTCAAGCAAAGAAATAAAGAAAATATGCACGAAGCGTGGAGTAAATTTAAACG
AATGGTGAAGTCATGCCTCCACAATGGCACACCTAAATGTATCTTGATGGAGACTTCTGATGTTGTGTTTGTAGGAGGGATGTTGAAGAGTTCATACAACCAGATAAAGA
CAACGCTAGACTCTATAACCAACAATAGAGAAAGAGAAAAAATTAAAGATGGAATAGATAGAAATGCAATGGTGACATTGCAAGGACAATTAACTGTAATGAACAAATTG
TTGCAATCAATGACTTTAATGCCAGTTGATGTGTAA
Protein sequenceShow/hide protein sequence
MKKFFPSIKNERREQDLMLFKQRNKENMHEAWSKFKRMVKSCLHNGTPKCILMETSDVVFVGGMLKSSYNQIKTTLDSITNNREREKIKDGIDRNAMVTLQGQLTVMNKL
LQSMTLMPVDV