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IVF0011210 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011210
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr01:4150937..4151240
RNA-Seq ExpressionIVF0011210
SyntenyIVF0011210
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038378.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.46e-0862.5Show/hide
Query:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK
        L K W KLK  F +LF +F  NG+LNAC+ ENFICLI+KK
Subjt:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK

KAA0039228.1 hypothetical protein E6C27_scaffold64G00170 [Cucumis melo var. makuwa]1.88e-1450Show/hide
Query:  MAYTKGFQGIDVFLSLETGLVSLPI----IICYFS--------------------------LSKHWQKLKGSFKNLFDDFQRNGRLNA
        MAYTKGFQG D FLS +TGLVSLPI    ++  FS                          L KHW KLKGSFKNLFDDF RNGR ++
Subjt:  MAYTKGFQGIDVFLSLETGLVSLPI----IICYFS--------------------------LSKHWQKLKGSFKNLFDDFQRNGRLNA

KAA0043278.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.37e-1072.5Show/hide
Query:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK
        L  +W KLK S KNL DDF  NGR NACV+ENFICLIQKK
Subjt:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK

KAA0059514.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]1.63e-0865Show/hide
Query:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK
        L K+W   K  FK+L DDF  NGRLNA +QENFICL+QKK
Subjt:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK

XP_038905468.1 probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Benincasa hispida]8.73e-0960.53Show/hide
Query:  KHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK
        K W  LK + K++FD+F RNG+LN+C++ENF+CLIQKK
Subjt:  KHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK

TrEMBL top hitse value%identityAlignment
A0A5A7T695 LINE-1 retrotransposable element ORF2 protein9.8e-0662.5Show/hide
Query:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK
        L K W KLK  F +LF +F  NG+LNAC+ ENFICLI+KK
Subjt:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK

A0A5A7T8L2 Reverse transcriptase domain-containing protein5.9e-1150Show/hide
Query:  MAYTKGFQGIDVFLSLETGLVSLPI----IICYFS--------------------------LSKHWQKLKGSFKNLFDDFQRNGRLNA
        MAYTKGFQG D FLS +TGLVSLPI    ++  FS                          L KHW KLKGSFKNLFDDF RNGR ++
Subjt:  MAYTKGFQGIDVFLSLETGLVSLPI----IICYFS--------------------------LSKHWQKLKGSFKNLFDDFQRNGRLNA

A0A5A7UWP4 Transposon TX1 uncharacterized4.4e-0665Show/hide
Query:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK
        L K+W   K  FK+L DDF  NGRLNA +QENFICL+QKK
Subjt:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK

A0A5D3CIL8 Uncharacterized protein4.9e-0562.5Show/hide
Query:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK
        L K W  +K +   LF+DF  NGR NACVQENF+CLIQKK
Subjt:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK

A0A5D3E0C0 LINE-1 retrotransposable element ORF2 protein5.2e-0772.5Show/hide
Query:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK
        L  +W KLK S KNL DDF  NGR NACV+ENFICLIQKK
Subjt:  LSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTATACAAAAGGATTCCAGGGGATAGATGTATTCCTTTCATTAGAGACTGGCCTTGTGTCACTCCCAATCATAATATGCTACTTTTCCTTGTCAAAGCATTGGCA
GAAGTTAAAAGGAAGCTTCAAAAACCTGTTTGACGATTTTCAAAGAAATGGAAGACTAAATGCTTGTGTTCAAGAAAATTTCATTTGTTTAATACAAAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTATACAAAAGGATTCCAGGGGATAGATGTATTCCTTTCATTAGAGACTGGCCTTGTGTCACTCCCAATCATAATATGCTACTTTTCCTTGTCAAAGCATTGGCA
GAAGTTAAAAGGAAGCTTCAAAAACCTGTTTGACGATTTTCAAAGAAATGGAAGACTAAATGCTTGTGTTCAAGAAAATTTCATTTGTTTAATACAAAAGAAATAA
Protein sequenceShow/hide protein sequence
MAYTKGFQGIDVFLSLETGLVSLPIIICYFSLSKHWQKLKGSFKNLFDDFQRNGRLNACVQENFICLIQKK