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IVF0011212 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011212
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChromo domain-containing protein
Genome locationchr12:12053693..12054187
RNA-Seq ExpressionIVF0011212
SyntenyIVF0011212
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10982.1 extensin-3-like [Cucumis melo var. makuwa]1.76e-1469.49Show/hide
Query:  VATGRDGGLVTVADGATENDGYAKRLVVDRLSLLAADFRRPYGWLRRRLDST-VASDGR
        V  GR G LVT ADGA E+ GYAKRL+VDRL LLA DFRRPYGWLRRRL++  + +DGR
Subjt:  VATGRDGGLVTVADGATENDGYAKRLVVDRLSLLAADFRRPYGWLRRRLDST-VASDGR
TYK21920.1 Chromo domain-containing protein [Cucumis melo var. makuwa]3.49e-1869.12Show/hide
Query:  GRDGGLVTVADGATENDGYAKRLVVDRLSLLAADFRRPYGWLRRRLDSTVASDGRSAAVIGRGRRQRL
        G+   +VT ADGA + +GYAKRLVVDRL  LAADFRRPYGWL+R LD+ VA DGRS AVI  GRR RL
Subjt:  GRDGGLVTVADGATENDGYAKRLVVDRLSLLAADFRRPYGWLRRRLDSTVASDGRSAAVIGRGRRQRL
TrEMBL top hitse value%identityAlignment
A0A5D3CI60 Extensin-3-like1.5e-1269.49Show/hide
Query:  VATGRDGGLVTVADGATENDGYAKRLVVDRLSLLAADFRRPYGWLRRRLDST-VASDGR
        V  GR G LVT ADGA E+ GYAKRL+VDRL LLA DFRRPYGWLRRRL++  + +DGR
Subjt:  VATGRDGGLVTVADGATENDGYAKRLVVDRLSLLAADFRRPYGWLRRRLDST-VASDGR
A0A5D3DEV2 Chromo domain-containing protein2.4e-1569.12Show/hide
Query:  GRDGGLVTVADGATENDGYAKRLVVDRLSLLAADFRRPYGWLRRRLDSTVASDGRSAAVIGRGRRQRL
        G+   +VT ADGA + +GYAKRLVVDRL  LAADFRRPYGWL+R LD+ VA DGRS AVI  GRR RL
Subjt:  GRDGGLVTVADGATENDGYAKRLVVDRLSLLAADFRRPYGWLRRRLDSTVASDGRSAAVIGRGRRQRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCGACGCGGCTTGCGGGTCGGGGCGTGGAGCGACACGACTGGCGAGTCGGGGCGGAGTGACGCGGCTTGCGAGTCGAGGAGGAGCGACGCGGATTTCGAGCGCAA
GCAGGAGAAGAGACGCGGCTCGGCTTCGCAACCTCGACTGACGGTGCTTGGTTTCAACGGCCGATGCTCGGTTTCGACGGACGTCGCGACTGGGCGAGACGGCGGGCTTG
TAACGGTAGCTGACGGAGCGACGGAGAACGACGGCTACGCGAAGCGGCTTGTGGTGGATCGGCTCAGTTTGCTTGCGGCTGACTTTCGACGACCGTACGGCTGGCTTCGA
AGACGGCTCGACAGCACGGTGGCTTCAGACGGACGGTCGGCGGCGGTGATTGGAAGAGGGCGGCGGCAGCGGCTAGGGCTTGAAGGGTTTGGGATTAGGGTTTATTTGGG
GAAGATGATGAATAGTCTTCCACGTTTTCCAATGCCCTTTTTATTAAAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCGACGCGGCTTGCGGGTCGGGGCGTGGAGCGACACGACTGGCGAGTCGGGGCGGAGTGACGCGGCTTGCGAGTCGAGGAGGAGCGACGCGGATTTCGAGCGCAA
GCAGGAGAAGAGACGCGGCTCGGCTTCGCAACCTCGACTGACGGTGCTTGGTTTCAACGGCCGATGCTCGGTTTCGACGGACGTCGCGACTGGGCGAGACGGCGGGCTTG
TAACGGTAGCTGACGGAGCGACGGAGAACGACGGCTACGCGAAGCGGCTTGTGGTGGATCGGCTCAGTTTGCTTGCGGCTGACTTTCGACGACCGTACGGCTGGCTTCGA
AGACGGCTCGACAGCACGGTGGCTTCAGACGGACGGTCGGCGGCGGTGATTGGAAGAGGGCGGCGGCAGCGGCTAGGGCTTGAAGGGTTTGGGATTAGGGTTTATTTGGG
GAAGATGATGAATAGTCTTCCACGTTTTCCAATGCCCTTTTTATTAAAAAAATAA
Protein sequenceShow/hide protein sequence
MRRRGLRVGAWSDTTGESGRSDAACESRRSDADFERKQEKRRGSASQPRLTVLGFNGRCSVSTDVATGRDGGLVTVADGATENDGYAKRLVVDRLSLLAADFRRPYGWLR
RRLDSTVASDGRSAAVIGRGRRQRLGLEGFGIRVYLGKMMNSLPRFPMPFLLKK