; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011242 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011242
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr12:14526489..14526641
RNA-Seq ExpressionIVF0011242
SyntenyIVF0011242
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.30e-1174Show/hide
Query:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
        MP+GRPRKH  AEASNA   A M S +SDAESSRPHV+ N EEQLLDRLA
Subjt:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.30e-1174Show/hide
Query:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
        MPRG+PRKH  AEASNA   A M S +SDAESSRP V+EN EEQLLDRLA
Subjt:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
KAA0047616.1 uncharacterized protein E6C27_scaffold115G00890 [Cucumis melo var. makuwa]6.04e-1176Show/hide
Query:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
        MPRGRPRK  VAEASNA   A M SE+SDAESSR HV+ N EEQLLDRLA
Subjt:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
KAA0056913.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.60e-1276Show/hide
Query:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
        MPRGRPRK  VAEASNA   A M SE+ DAESSRPHV+ N EEQLLDRLA
Subjt:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]8.31e-1174Show/hide
Query:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
        MPRG+PRKH  AEASNA   A M S +SDAESSRP V+EN EEQLLDRLA
Subjt:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein9.6e-0874Show/hide
Query:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
        MP+GRPRKH  AEASNA   A M S +SDAESSRPHV+ N EEQLLDRLA
Subjt:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
A0A5A7T1M0 Reverse transcriptase9.6e-0874Show/hide
Query:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
        MPRG+PRKH  AEASNA   A M S +SDAESSRP V+EN EEQLLDRLA
Subjt:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
A0A5A7U067 Retrotrans_gag domain-containing protein1.6e-0776Show/hide
Query:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
        MPRGRPRK  VAEASNA   A M SE+SDAESSR HV+ N EEQLLDRLA
Subjt:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
A0A5A7ULX5 DNA/RNA polymerases superfamily protein1.5e-0876Show/hide
Query:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
        MPRGRPRK  VAEASNA   A M SE+ DAESSRPHV+ N EEQLLDRLA
Subjt:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
A0A5D3BB91 Reverse transcriptase9.6e-0874Show/hide
Query:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
        MPRG+PRKH  AEASNA   A M S +SDAESSRP V+EN EEQLLDRLA
Subjt:  MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGAGGTAGACCTCGAAAGCACCATGTTGCAGAAGCTAGTAACGCTACTACAGGAGCAACTATGAGGAGTGAGAAGTCTGATGCCGAATCTAGTCGTCCCCATGT
TAAGGAGAATGAGGAAGAGCAATTGCTTGATAGACTAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGAGGTAGACCTCGAAAGCACCATGTTGCAGAAGCTAGTAACGCTACTACAGGAGCAACTATGAGGAGTGAGAAGTCTGATGCCGAATCTAGTCGTCCCCATGT
TAAGGAGAATGAGGAAGAGCAATTGCTTGATAGACTAGCTTAA
Protein sequenceShow/hide protein sequence
MPRGRPRKHHVAEASNATTGATMRSEKSDAESSRPHVKENEEEQLLDRLA