; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011276 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011276
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSuccinate dehydrogenase assembly factor 4, mitochondrial
Genome locationchr09:23493306..23494020
RNA-Seq ExpressionIVF0011276
SyntenyIVF0011276
Gene Ontology termsGO:0034553 - mitochondrial respiratory chain complex II assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR012875 - Succinate dehydrogenase assembly factor 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042555.1 succinate dehydrogenase assembly factor 4 [Cucumis melo var. makuwa]2.97e-69100Show/hide
Query:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
        MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
Subjt:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG

Query:  DWERNGRCYDF
        DWERNGRCYDF
Subjt:  DWERNGRCYDF

KGN49871.1 hypothetical protein Csa_000062 [Cucumis sativus]1.58e-5586.49Show/hide
Query:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
        MSS+LSRLFSSPPTLSALP V RLT NSLSRFVSSSSNQQPSR E+GVSSEEQREA KGSSPN+HEAAGDDRG QD+GVDTEKM  EIGGPKG EPTRYG
Subjt:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG

Query:  DWERNGRCYDF
        DWER GRC DF
Subjt:  DWERNGRCYDF

XP_022957978.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita moschata]8.34e-4472.97Show/hide
Query:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
        MSS+L+RLFS PP+L+AL  V R TS S+SR VSSS+NQQPSR EQGV  EEQREA KGS P+QHEAAGDDR S+D+G D  K   E+GGPKG EPTRYG
Subjt:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG

Query:  DWERNGRCYDF
        DWERNGRCYDF
Subjt:  DWERNGRCYDF

XP_022995844.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita maxima]1.44e-4472.97Show/hide
Query:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
        MSS+L+RLFS PP+L+AL  V R+TS S+SR VSSS+NQQPSR EQGV  EEQREA KGS P+QHEAAGDDR S+D+G D  K   E+GGPKG EPTRYG
Subjt:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG

Query:  DWERNGRCYDF
        DWERNGRCYDF
Subjt:  DWERNGRCYDF

XP_023532848.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita pepo subsp. pepo]2.39e-4372.07Show/hide
Query:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
        MSS+L+RLFS PP+L++L  V R TS S+SR VSSS+NQQPSR EQGV  EEQREA KGS P+QHEAAGDDR S+D+G D  K   E+GGPKG EPTRYG
Subjt:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG

Query:  DWERNGRCYDF
        DWERNGRCYDF
Subjt:  DWERNGRCYDF

TrEMBL top hitse value%identityAlignment
A0A0A0KQ66 Succinate dehydrogenase assembly factor 4, mitochondrial2.3e-4186.49Show/hide
Query:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
        MSS+LSRLFSSPPTLSALP V RLT NSLSRFVSSSSNQQPSR E+GVSSEEQREA KGSSPN+HEAAGDDRG QD+GVDTEKM  EIGGPKG EPTRYG
Subjt:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG

Query:  DWERNGRCYDF
        DWER GRC DF
Subjt:  DWERNGRCYDF

A0A5A7TMD3 Succinate dehydrogenase assembly factor 4, mitochondrial8.3e-52100Show/hide
Query:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
        MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
Subjt:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG

Query:  DWERNGRCYDF
        DWERNGRCYDF
Subjt:  DWERNGRCYDF

A0A6A3BZE2 Succinate dehydrogenase assembly factor 4, mitochondrial1.2e-1047.41Show/hide
Query:  LSRLFSS-------PPTLSAL--PTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHE
        LSRLFSS        P+ +     +V R  SNS +RFV SS+ QQ   +  G   EE REA K +  ++++  G+D    D+G    K   E+GGPKG E
Subjt:  LSRLFSS-------PPTLSAL--PTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHE

Query:  PTRYGDWERNGRCYDF
        PTRYGDWERNGRCYDF
Subjt:  PTRYGDWERNGRCYDF

A0A6J1H1T7 Succinate dehydrogenase assembly factor 4, mitochondrial1.9e-3272.97Show/hide
Query:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
        MSS+L+RLF SPP+L+AL  V R TS S+SR VSSS+NQQPSR EQGV  EEQREA KGS P+QHEAAGDDR S+D+G D  K   E+GGPKG EPTRYG
Subjt:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG

Query:  DWERNGRCYDF
        DWERNGRCYDF
Subjt:  DWERNGRCYDF

A0A6J1K722 Succinate dehydrogenase assembly factor 4, mitochondrial5.0e-3372.97Show/hide
Query:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG
        MSS+L+RLF SPP+L+AL  V R+TS S+SR VSSS+NQQPSR EQGV  EEQREA KGS P+QHEAAGDDR S+D+G D  K   E+GGPKG EPTRYG
Subjt:  MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYG

Query:  DWERNGRCYDF
        DWERNGRCYDF
Subjt:  DWERNGRCYDF

SwissProt top hitse value%identityAlignment
Q9VLU6 Succinate dehydrogenase assembly factor 4, mitochondrial5.6e-0567.74Show/hide
Query:  TEKMAPEIGGPKGHEPTRYGDWERNGRCYDF
        T     EIGGP G EPTRYGDWER GR  DF
Subjt:  TEKMAPEIGGPKGHEPTRYGDWERNGRCYDF

Arabidopsis top hitse value%identityAlignment
AT5G67490.1 unknown protein2.2e-0437.27Show/hide
Query:  LSRLFSS---PPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYGD
        +SR  SS   PP  +  P      +  L+R V    N Q +   Q    EE+ E E G         G +  ++D G        EIGGP+G EPTRYGD
Subjt:  LSRLFSS---PPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYGD

Query:  WERNGRCYDF
        WE+ GRC DF
Subjt:  WERNGRCYDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCCATCTCAGCCGCCTGTTCTCGTCGCCGCCGACTCTGTCAGCCCTGCCGACGGTGGGTCGCCTAACTTCCAACTCGTTGAGCCGATTCGTTAGTTCCTCGTC
CAATCAACAGCCTTCTCGATCGGAGCAAGGTGTGTCTAGCGAGGAACAACGAGAGGCCGAGAAAGGAAGTTCGCCGAATCAACACGAGGCTGCCGGAGATGACCGAGGTA
GTCAAGATCAAGGAGTTGATACGGAAAAAATGGCCCCCGAGATCGGTGGACCAAAAGGCCACGAGCCCACACGCTACGGCGATTGGGAACGAAATGGTCGGTGCTACGAT
TTTTAA
mRNA sequenceShow/hide mRNA sequence
GGTAATATGAAGAACAGCATTCAGTGACACGTGGTCGGTGGTTTTTCTTTTTTTGCTCAATACGACGTCGTATCGCGGCAATATAAATATTAATTTTCGTCACCCGCCAA
CCGCCGGGTGTTCGCGGATCCGATTGAGTAAACAAAGTATGTCGAGCCATCTCAGCCGCCTGTTCTCGTCGCCGCCGACTCTGTCAGCCCTGCCGACGGTGGGTCGCCTA
ACTTCCAACTCGTTGAGCCGATTCGTTAGTTCCTCGTCCAATCAACAGCCTTCTCGATCGGAGCAAGGTGTGTCTAGCGAGGAACAACGAGAGGCCGAGAAAGGAAGTTC
GCCGAATCAACACGAGGCTGCCGGAGATGACCGAGGTAGTCAAGATCAAGGAGTTGATACGGAAAAAATGGCCCCCGAGATCGGTGGACCAAAAGGCCACGAGCCCACAC
GCTACGGCGATTGGGAACGAAATGGTCGGTGCTACGATTTTTAACATTTCGAGGTTAGATTGTGAACAAGATCTTAGGATGATATGATTTCTGTAACTCAATTTCGTGAG
CTTTGTTTTCTTTAATCAGAGTTATTATTTCGTTTTTCTGTAAATTCATTTCCAGTACTGTATGCGTTTCTTCGAGATCGAAAGGAAATTAGAATAATAGTATTCATCGT
TTCAATAGTACTCGATTCTGGTTATCTTCTTGCATTACGCTTTTGTTTAGTCAGG
Protein sequenceShow/hide protein sequence
MSSHLSRLFSSPPTLSALPTVGRLTSNSLSRFVSSSSNQQPSRSEQGVSSEEQREAEKGSSPNQHEAAGDDRGSQDQGVDTEKMAPEIGGPKGHEPTRYGDWERNGRCYD
F