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IVF0011285 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011285
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr02:13199415..13200048
RNA-Seq ExpressionIVF0011285
SyntenyIVF0011285
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]1.45e-10386.96Show/hide
Query:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA
        +YDKPTTRKQKK   SKSTQNPDGSKIQA EWSSRESMLFAEL I+DDLKDETYLAAFLSCWLC F+FPQK SFL PGVFR ASLMAACTIYSLAVPVLA
Subjt:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA

Query:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL
        NIYHGLGLITKASNPI RMDF+F MHYVHGWL HY GT YPL TEVRG KMTNFSG+GGSIYFGEY+ARELIHNGARI WH NL
Subjt:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]1.18e-10284.78Show/hide
Query:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA
        +YDKP TRKQKK   SKSTQNPDGSKIQAREWSSRESMLFAEL IRDDLKDETYLAAFLSCWLC FVFP+K SFL P VFRVASLM A TIYSLAVPVLA
Subjt:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA

Query:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL
        NIYHGLGLITKASNPI RMDF+F MHYVHGWL HY GT YPL  EVRG KMTNFSG+GGSIYFG+Y+A ELIHNGARI WH NL
Subjt:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL

TYK06278.1 hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa]1.04e-10186.41Show/hide
Query:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA
        +YDKPTTRKQKK   SKSTQNPDG KIQAREWSSRESMLFAEL I+DDLKDETYLAAFLSCWLC FVFPQK SFL PGVFR ASLMAA TIYSLAVPVLA
Subjt:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA

Query:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL
        NIYHGLGLITKASNPI RMDF+F MHYVHGWL HY GT YPL TEVRG KMTNFSG+GGSIYFGEY+ARELIHN ARI WH NL
Subjt:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL

TYK06377.1 hypothetical protein E5676_scaffold163G00690 [Cucumis melo var. makuwa]9.25e-10296.86Show/hide
Query:  RMTPNYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAV
        R+T  YDKPTTRKQKKEP SKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAV
Subjt:  RMTPNYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAV

Query:  PVLANIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFS
        PVLANIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRG KMTNFS
Subjt:  PVLANIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFS

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]4.24e-10387.64Show/hide
Query:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA
        +YDKPTTRKQKK   SKSTQNPDGSKIQAREWSSRESMLFAEL IRDDLKDETYLAAFLSCWLC FVFPQK SFL PGVFRVASLMAA TIYSLAVPVLA
Subjt:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA

Query:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARI
        NIYHGLGLITKASNPI RMDF+F MHYVHGWL +Y GT YPL TEVR  KMTNFSG+GGSIYFG+Y+ARELIHNGARI
Subjt:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARI

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein1.4e-8686.96Show/hide
Query:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA
        +YDKPTTRKQKK   SKSTQNPDGSKIQA EWSSRESMLFAEL I+DDLKDETYLAAFLSCWLC F+FPQK SFL PGVFR ASLMAACTIYSLAVPVLA
Subjt:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA

Query:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL
        NIYHGLGLITKASNPI RMDF+F MHYVHGWL HY GT YPL TEVRG KMTNFSG+GGSIYFGEY+ARELIHNGARI WH NL
Subjt:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL

A0A5A7U8L3 PMD domain-containing protein5.5e-8384.78Show/hide
Query:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA
        +YDKPTTRKQK    SKST+NPDGSKIQ REWSSRESMLFAEL I+DDLKDETYLAAFLSCWLC FVFPQK SFL PGVFR ASLMAA TIYSLAVPVLA
Subjt:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA

Query:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL
        NIYHGL LI KASNPI RMDF+F MHYVHGWL HY GT YPL TEVRG KMTNFSG GGSIYFGEY+ARELIHNGARI WH NL
Subjt:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL

A0A5A7UGW6 PMD domain-containing protein2.2e-8486.96Show/hide
Query:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA
        +YDKPTTRKQKK   SKSTQNPDGSKIQAREWSSRESMLFAEL IRDDLKDETYLAAFLSCWLC FVFPQK SFL  GVFRVASLMAA TIYSLAVPVLA
Subjt:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA

Query:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL
        NIYHGLGLITKASNPI RMDF+F MHYVHGWL HY GT YPL  EVRG KMTNFSG+GGSIYFGEY+ARELIHNG RI WH NL
Subjt:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL

A0A5A7VHW8 PMD domain-containing protein5.0e-8484.95Show/hide
Query:  TPNYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPV
        T +YDKPTTRKQK    SKSTQNPDGSKIQAREWSSRESMLFAEL I+DDLKDETYLAAFLSCWLC FVFPQK SFL PGVFR ASLM A TIYSLAVPV
Subjt:  TPNYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPV

Query:  LANIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL
        LANIYHGLGLITKASNP  RMDF+F MHYVHGWL HY GT YPL TEVRG KMTNFSG+GGSIYFGEY+AR+LIHNGARI WH NL
Subjt:  LANIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL

A0A5D3C543 PMD domain-containing protein3.8e-8486.41Show/hide
Query:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA
        +YDKPTTRKQKK   SKSTQNPDG KIQAREWSSRESMLFAEL I+DDLKDETYLAAFLSCWLC FVFPQK SFL PGVFR ASLMAA TIYSLAVPVLA
Subjt:  NYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVLA

Query:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL
        NIYHGLGLITKASNPI RMDF+F MHYVHGWL HY GT YPL TEVRG KMTNFSG+GGSIYFGEY+ARELIHN ARI WH NL
Subjt:  NIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGCTCGACATCTTCTAAGAATGACTCCTAACTATGATAAGCCAACAACGCGAAAGCAAAAGAAGGAGCCGTGCTCCAAATCTACTCAAAACCCTGATGGTTCGAA
GATCCAAGCTCGTGAATGGTCTTCTAGGGAAAGCATGTTATTTGCAGAACTTGCAATCAGGGATGATTTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTGCTGGT
TGTGTTTTTTCGTATTTCCTCAGAAAAGATCATTTCTTCATCCTGGAGTATTTAGGGTTGCAAGCCTAATGGCCGCTTGCACTATTTATAGTCTTGCTGTTCCAGTTTTG
GCAAACATATACCATGGGCTGGGTTTGATAACCAAAGCCTCCAATCCGATAGAACGCATGGACTTTTACTTTTTCATGCATTACGTCCATGGTTGGTTAGTCCATTATAT
TGGCACTGATTATCCACTTCGCACGGAAGTTCGAGGCCTTAAGATGACTAACTTTTCAGGTAAAGGCGGGTCTATTTATTTTGGGGAATATGATGCACGAGAATTGATCC
ATAATGGTGCAAGAATTTGGTGGCACGATAACCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCGCTCGACATCTTCTAAGAATGACTCCTAACTATGATAAGCCAACAACGCGAAAGCAAAAGAAGGAGCCGTGCTCCAAATCTACTCAAAACCCTGATGGTTCGAA
GATCCAAGCTCGTGAATGGTCTTCTAGGGAAAGCATGTTATTTGCAGAACTTGCAATCAGGGATGATTTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTGCTGGT
TGTGTTTTTTCGTATTTCCTCAGAAAAGATCATTTCTTCATCCTGGAGTATTTAGGGTTGCAAGCCTAATGGCCGCTTGCACTATTTATAGTCTTGCTGTTCCAGTTTTG
GCAAACATATACCATGGGCTGGGTTTGATAACCAAAGCCTCCAATCCGATAGAACGCATGGACTTTTACTTTTTCATGCATTACGTCCATGGTTGGTTAGTCCATTATAT
TGGCACTGATTATCCACTTCGCACGGAAGTTCGAGGCCTTAAGATGACTAACTTTTCAGGTAAAGGCGGGTCTATTTATTTTGGGGAATATGATGCACGAGAATTGATCC
ATAATGGTGCAAGAATTTGGTGGCACGATAACCTCTAG
Protein sequenceShow/hide protein sequence
MTARHLLRMTPNYDKPTTRKQKKEPCSKSTQNPDGSKIQAREWSSRESMLFAELAIRDDLKDETYLAAFLSCWLCFFVFPQKRSFLHPGVFRVASLMAACTIYSLAVPVL
ANIYHGLGLITKASNPIERMDFYFFMHYVHGWLVHYIGTDYPLRTEVRGLKMTNFSGKGGSIYFGEYDARELIHNGARIWWHDNL