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IVF0011304 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011304
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr08:29435673..29436040
RNA-Seq ExpressionIVF0011304
SyntenyIVF0011304
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2066470.1 hypothetical protein ES319_A09G162200v1 [Gossypium barbadense]5.08e-1345.78Show/hide
Query:  FLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK
        F GF+L F   +S     I +  ++RPFSI P        +    SKIFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  FLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK

KAE8649554.1 hypothetical protein Csa_018195 [Cucumis sativus]5.44e-3887.32Show/hide
Query:  MGFLNLKCLFLGFLLTFVSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGK
        MGF+N KCLFLGFLLTFV FR GVI+VEGSSRPFSISPIL+L+KGF+GYYDS+IFATMGIECKCCDEIGGK
Subjt:  MGFLNLKCLFLGFLLTFVSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGK

KAG6595355.1 hypothetical protein SDJN03_11908, partial [Cucurbita argyrosperma subsp. sororia]3.99e-2056.32Show/hide
Query:  KCLFLGFLLTFVSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCD-EIGGKCSTEFTS-SCSNLHCSPWKQY
        K   +G +L    F  GV+ VEGSSR   + P+   + GFE Y DS + AT+GIECKCCD EIGGKCST F + SCSNL CSPWK Y
Subjt:  KCLFLGFLLTFVSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCD-EIGGKCSTEFTS-SCSNLHCSPWKQY

TYJ19036.1 hypothetical protein E1A91_A09G163400v1 [Gossypium mustelinum]3.58e-1345.24Show/hide
Query:  LFLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK
        +F GF+L F   +S     I +  ++RPFSI P        +    SKIFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  LFLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK

XP_003516905.1 uncharacterized protein LOC100806570 [Glycine max]5.48e-1355.77Show/hide
Query:  LELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWKQY
        L L    +GY  SK FAT+G+ CKCCD +GG C++ +T SCSNL CSPWK +
Subjt:  LELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWKQY

TrEMBL top hitse value%identityAlignment
A0A0A0KXD1 Uncharacterized protein3.7e-4289.01Show/hide
Query:  MGFLNLKCLFLGFLLTFVSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWKQY
        MGF+N KCLFLGFLLTFV FR GVI+VEGSSRPFSISPIL+L+KGF+GYYDS+IFATMGIECKCCDEIGGKCSTEFT+SCSNLHCSPWKQY
Subjt:  MGFLNLKCLFLGFLLTFVSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWKQY

A0A2P5W5Y8 Uncharacterized protein1.9e-0945.78Show/hide
Query:  FLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK
        F GF+L F   +S     I +  ++RPFSI P        +    SKIFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  FLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK

A0A5D2FAA9 Uncharacterized protein1.9e-0945.78Show/hide
Query:  FLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK
        F GF+L F   +S     I +  ++RPFSI P        +    SKIFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  FLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK

A0A5D2P3S3 Uncharacterized protein1.9e-0945.78Show/hide
Query:  FLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK
        F GF+L F   +S     I +  ++RPFSI P        +    SKIFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  FLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK

A0A5D2XZ15 Uncharacterized protein1.4e-0945.24Show/hide
Query:  LFLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK
        +F GF+L F   +S     I +  ++RPFSI P        +    SKIFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  LFLGFLLTF---VSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTTTGAATTTGAAGTGTTTGTTTCTGGGTTTTCTTCTAACGTTTGTTTCTTTTAGAAAAGGAGTTATTATAGTAGAAGGTAGCAGTAGGCCCTTTTCAATTTC
CCCAATACTCGAGCTTCGGAAAGGTTTTGAGGGATATTATGATTCAAAGATTTTTGCAACAATGGGAATTGAATGTAAGTGTTGTGATGAGATTGGAGGTAAATGCTCTA
CTGAGTTTACTTCTTCTTGCTCTAATCTCCATTGTTCCCCTTGGAAACAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTTTGAATTTGAAGTGTTTGTTTCTGGGTTTTCTTCTAACGTTTGTTTCTTTTAGAAAAGGAGTTATTATAGTAGAAGGTAGCAGTAGGCCCTTTTCAATTTC
CCCAATACTCGAGCTTCGGAAAGGTTTTGAGGGATATTATGATTCAAAGATTTTTGCAACAATGGGAATTGAATGTAAGTGTTGTGATGAGATTGGAGGTAAATGCTCTA
CTGAGTTTACTTCTTCTTGCTCTAATCTCCATTGTTCCCCTTGGAAACAATATTAA
Protein sequenceShow/hide protein sequence
MGFLNLKCLFLGFLLTFVSFRKGVIIVEGSSRPFSISPILELRKGFEGYYDSKIFATMGIECKCCDEIGGKCSTEFTSSCSNLHCSPWKQY