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IVF0011311 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011311
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLa-related protein 6 isoform 1
Genome locationchr05:20434742..20436990
RNA-Seq ExpressionIVF0011311
SyntenyIVF0011311
Gene Ontology termsGO:0034599 - cellular response to oxidative stress (biological process)
GO:0071470 - cellular response to osmotic stress (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148325.2 uncharacterized protein LOC101221328 [Cucumis sativus]6.02e-11189.01Show/hide
Query:  MSLPSSQLSFLSTAFSFS-FSPP-RAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPS
        MSLPSSQL+FLSTAFSFS FSPP R HNLRLL+SS+ ++SCKLPP S DPKGNENRVA LAIVTLMAG+LTLGSVHDASAAKTGGRVGGQAFRSAAPRPS
Subjt:  MSLPSSQLSFLSTAFSFS-FSPP-RAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPS

Query:  SPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGG-WGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
        SPRINNNSRTNIYINPRVAPPL GGYG+GYGVPYYGG WGWSPFSFFAPSP VAVGIGGGLDVLFFFILLG+VAAFVR+I GRRE DDDDY
Subjt:  SPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGG-WGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
XP_008451528.1 PREDICTED: uncharacterized protein LOC103492785 [Cucumis melo]5.75e-129100Show/hide
Query:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSP
        MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSP
Subjt:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSP

Query:  RINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
        RINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
Subjt:  RINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
XP_022969609.1 uncharacterized protein LOC111468585 [Cucurbita maxima]1.97e-9175.65Show/hide
Query:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDP----KGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSL SSQLSFLST  SFS +P    +  +L+S   +++ KLPP +D+P    +GNENR+AKLAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDP----KGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGG-WGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
         SSPRINNNSRTNIYINPRVAPPLVGGYG  YGVPYYGG WGWSPFSFFAP+P+VAVGIGGG DVL  FI LG+VAAFVR+ LG RE DDDDY
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGG-WGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
XP_038889537.1 uncharacterized protein LOC120079434 isoform X1 [Benincasa hispida]1.13e-10283.16Show/hide
Query:  MSLPSSQLSFLSTAFSFSFS---PPRAHNLRLLYSSSAVVSCKLPPASDDP-----KGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRS
        MSL SSQLSFLSTAFSFSFS   P R +NL  L+SS+A VSCKLPPA+DDP     +G+ENR+AKLAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRS
Subjt:  MSLPSSQLSFLSTAFSFSFS---PPRAHNLRLLYSSSAVVSCKLPPASDDP-----KGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRS

Query:  AAPRPSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
        AAPR SSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSP VAVGIGGG D+LF FILLG+VAAFVR+  GRRE DDDDY
Subjt:  AAPRPSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
XP_038889538.1 uncharacterized protein LOC120079434 isoform X2 [Benincasa hispida]1.21e-10585.86Show/hide
Query:  MSLPSSQLSFLSTAFSFSFS---PPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRP
        MSL SSQLSFLSTAFSFSFS   P R +NL  L+SS+A VSCKLPPA+DDPKG+ENR+AKLAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRSAAPR 
Subjt:  MSLPSSQLSFLSTAFSFSFS---PPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRP

Query:  SSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
        SSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSP VAVGIGGG D+LF FILLG+VAAFVR+  GRRE DDDDY
Subjt:  SSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
TrEMBL top hitse value%identityAlignment
A0A0A0LGT3 Uncharacterized protein1.1e-8589.01Show/hide
Query:  MSLPSSQLSFLSTAFSF-SFS-PPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPS
        MSLPSSQL+FLSTAFSF SFS PPR HNLRLL+SS+ ++SCKLPP S DPKGNENRVA LAIVTLMAG+LTLGSVHDASAAKTGGRVGGQAFRSAAPRPS
Subjt:  MSLPSSQLSFLSTAFSF-SFS-PPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPS

Query:  SPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
        SPRINNNSRTNIYINPRVAPPL GGYG+GYGVPYY GGWGWSPFSFFAPSP VAVGIGGGLDVLFFFILLG+VAAFVR+I GRRE DDDDY
Subjt:  SPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
A0A1S3BRQ8 uncharacterized protein LOC1034927852.4e-99100Show/hide
Query:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSP
        MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSP
Subjt:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSP

Query:  RINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
        RINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
Subjt:  RINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
A0A5A7U097 La-related protein 6 isoform 12.4e-99100Show/hide
Query:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSP
        MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSP
Subjt:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSP

Query:  RINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
        RINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
Subjt:  RINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
A0A6J1FDE3 uncharacterized protein LOC1114443535.1e-7075.13Show/hide
Query:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDP----KGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSL SSQLSFLST  SFS +P    +  +L+S   +++ KLPP +DDP    +GNENR+AKLAIVTL AG+L+LGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDP----KGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
         SSPRINNNSRTNIYINPRVAPPLVGGY  GYGVPYY GGWGWSPFSFFAP+P+VAVGIGGG DVL  FI LG+VAAFVR+ LG R  DDDDY
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
A0A6J1I348 uncharacterized protein LOC1114685851.0e-7075.65Show/hide
Query:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDP----KGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSL SSQLSFLST  SFS +P    +  +L+S   +++ KLPP +D+P    +GNENR+AKLAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDP----KGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
         SSPRINNNSRTNIYINPRVAPPLVGGY  GYGVPYY GGWGWSPFSFFAP+P+VAVGIGGG DVL  FI LG+VAAFVR+ LG RE DDDDY
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54520.1 unknown protein1.7e-0429.56Show/hide
Query:  LPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNEN----------------RVAKLAIVTLMAGILTLGSVHDASAAKTGGRVG
        LP +Q     T   +S    R++++RL  S    V  K   +S DP    N                 + K AI  ++ G+L     + A AA +GGR+G
Subjt:  LPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNEN----------------RVAKLAIVTLMAGILTLGSVHDASAAKTGGRVG

Query:  GQAFRSAAPRPSSPRINNNSRTNIYINPRVAPPLVGGYGFGYG---VPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVA-AFVRKILGRRE
        G +F S +      R +++S +  Y  PR + P      F Y     PYYG    SPF      P V  G GG     F  IL+G  A   V   L  R 
Subjt:  GQAFRSAAPRPSSPRINNNSRTNIYINPRVAPPLVGGYGFGYG---VPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVA-AFVRKILGRRE

Query:  ADD
         DD
Subjt:  ADD
AT5G57345.1 unknown protein8.4e-4955.73Show/hide
Query:  SLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKL---PPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPS
        ++ SS+ SFLS  FSF  S     N+ L   +S  + CK       +D  + NEN++AKLAI TL  G+L LGSV DA AAK+GGR+GGQAFRS+APRP 
Subjt:  SLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKL---PPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPS

Query:  SPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRR--EADDDDY
         PRINN SRTNIY+NP+VAPPL+GGYG+G     YGG+GWSPFSFFAP P VAVG+GGG D+L  F+  G+ +A  R     R  E D+DDY
Subjt:  SPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRR--EADDDDY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTACCTTCCTCCCAACTCAGTTTTCTCTCCACCGCCTTCTCTTTCTCCTTCTCCCCTCCACGGGCCCACAACCTTCGTCTCCTCTATTCTTCCAGTGCCGTCGT
CTCTTGCAAACTCCCTCCCGCTTCCGATGATCCCAAGGGAAATGAGAATCGGGTCGCGAAGCTTGCGATTGTTACTTTAATGGCTGGGATTCTGACATTGGGATCGGTTC
ATGATGCTTCCGCCGCCAAGACTGGCGGCCGAGTCGGCGGTCAGGCCTTCCGTTCGGCGGCTCCTCGGCCGTCGTCCCCGAGAATCAACAATAATTCTAGGACAAATATA
TACATAAATCCAAGAGTAGCACCTCCATTAGTAGGTGGCTATGGGTTTGGATATGGTGTGCCATACTATGGTGGATGGGGATGGTCACCATTTTCATTCTTTGCACCTTC
CCCAACAGTTGCTGTTGGCATTGGAGGAGGTCTTGATGTTCTTTTCTTCTTCATTTTGCTTGGTTCTGTTGCAGCTTTTGTGAGAAAAATCCTTGGAAGAAGGGAAGCAG
ATGATGATGATTACTAA
mRNA sequenceShow/hide mRNA sequence
ATTGAAATCCTTCCACGTGTACATCTCACAATCATGAAAATTTAGAACCAACAAAATCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCCTCCTTCTTCCCCCCATTCTCAA
TTCTCCACAAAAACAAAAACAAAAAAAAATCTTAATCCCTTATTCTACATCCTTCCCTTTCCGCCAATTCTCCTCACCATGTCATTACCTTCCTCCCAACTCAGTTTTCT
CTCCACCGCCTTCTCTTTCTCCTTCTCCCCTCCACGGGCCCACAACCTTCGTCTCCTCTATTCTTCCAGTGCCGTCGTCTCTTGCAAACTCCCTCCCGCTTCCGATGATC
CCAAGGGAAATGAGAATCGGGTCGCGAAGCTTGCGATTGTTACTTTAATGGCTGGGATTCTGACATTGGGATCGGTTCATGATGCTTCCGCCGCCAAGACTGGCGGCCGA
GTCGGCGGTCAGGCCTTCCGTTCGGCGGCTCCTCGGCCGTCGTCCCCGAGAATCAACAATAATTCTAGGACAAATATATACATAAATCCAAGAGTAGCACCTCCATTAGT
AGGTGGCTATGGGTTTGGATATGGTGTGCCATACTATGGTGGATGGGGATGGTCACCATTTTCATTCTTTGCACCTTCCCCAACAGTTGCTGTTGGCATTGGAGGAGGTC
TTGATGTTCTTTTCTTCTTCATTTTGCTTGGTTCTGTTGCAGCTTTTGTGAGAAAAATCCTTGGAAGAAGGGAAGCAGATGATGATGATTACTAATGACATTCAAGTCCT
TGGATGGAAATGTTGGGTTCATACTTTGTATTCACACTTTTAAACTTTAGCTTTTTAGTGGGAGAGTTTTTCTTTTGTCTTATTTGTATTAGAGGAGATGTTATGTAATT
AAAAAGCTTAAATGTATAAAATGTATAGTCAACCTCAGTTAAAATACATGAACTAAAAAAATATTATAACTATTTAAATACCTTTTTCTTATAGTTTTTGTTACTTTTAA
A
Protein sequenceShow/hide protein sequence
MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDPKGNENRVAKLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNI
YINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGLDVLFFFILLGSVAAFVRKILGRREADDDDY