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IVF0011315 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011315
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein ELF4-LIKE 3-like
Genome locationchr05:26609365..26609667
RNA-Seq ExpressionIVF0011315
SyntenyIVF0011315
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061471.1 protein ELF4-LIKE 3-like [Cucumis melo var. makuwa]3.97e-62100Show/hide
Query:  MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP
        MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP
Subjt:  MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP

KGN60512.1 hypothetical protein Csa_019281 [Cucumis sativus]7.42e-5895Show/hide
Query:  MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP
        M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIRELNNNIRRVVDLYADLSTSFT S EHGDSAAKPGYKRNRP
Subjt:  MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP

XP_022946747.1 protein ELF4-LIKE 3-like [Cucurbita moschata]8.75e-4170.64Show/hide
Query:  MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAA
        M+GETLS G      ++DGKM Q FQ NFVQVQNIL+QNR+LINEINQN ES+M   ++RNVGLIRELNNNIRRVVDLYA LS SFT S+E    G+SAA
Subjt:  MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

XP_023521403.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo]5.06e-4069.72Show/hide
Query:  MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAA
        M+GETLS G      ++DGKM   FQ NFVQVQNIL+QNR+LINEINQN ES+M   ++RNVGLIRELNNNIRRVVDLYA LS SFT S+E    G+SAA
Subjt:  MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

XP_038890489.1 protein ELF4-LIKE 3-like [Benincasa hispida]4.60e-4574.77Show/hide
Query:  MDGETLSRG-------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKP
        M+GETLS G       E+DGKMVQ FQ NFVQV+NIL+QNR+LINEINQN ES+M   ++RNVGLIRELNNNIRRVVDLYADLSTSFT SI+ GDSA KP
Subjt:  MDGETLSRG-------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKP

Query:  GYKRNRP
        G+KRNRP
Subjt:  GYKRNRP

TrEMBL top hitse value%identityAlignment
A0A0A0LIL2 Elf4 domain-containing protein2.2e-4395Show/hide
Query:  MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP
        M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIRELNNNIRRVVDLYADLSTSFT S EHGDSAAKPGYKRNRP
Subjt:  MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP

A0A1U7WX74 protein ELF4-LIKE 3-like1.2e-2868.27Show/hide
Query:  MDGETLSR----GEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYK
        M+G+TLS      +IDGK+VQ FQ NFVQVQNIL+QNR+LINEINQNQES++   +SRNVGLIRELNNNIRRVVDLYADLSTSFT S+++       G+K
Subjt:  MDGETLSR----GEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYK

Query:  RNRP
        R+RP
Subjt:  RNRP

A0A5D3CFW0 Protein ELF4-LIKE 3-like1.2e-46100Show/hide
Query:  MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP
        MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP
Subjt:  MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP

A0A6J1G4K6 protein ELF4-LIKE 3-like1.6e-3070.64Show/hide
Query:  MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAA
        M+GETLS G      ++DGKM Q FQ NFVQVQNIL+QNR+LINEINQN ES+M   ++RNVGLIRELNNNIRRVVDLYA LS SFT S+E    G+SAA
Subjt:  MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

A0A6J1KJ14 protein ELF4-LIKE 3-like1.6e-3070.64Show/hide
Query:  MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAA
        M+GETLS G      ++DGKM Q FQ NFVQVQNIL+QNR+LINEINQN ES+M   ++RNVGLIRELNNNIRRVVDLYA LS SFT S+E    G+SAA
Subjt:  MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 45.9e-1445.05Show/hide
Query:  ETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG
        E   +GE D  M +    NF QVQ++L++NR LI ++N N +SRMA  +S+NV LI+ELN NI +VV++Y+DL+TSF++    G +    G
Subjt:  ETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG

O80877 Protein ELF4-LIKE 11.5e-0938.95Show/hide
Query:  DGETL--SRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG
        DGE +  S    D ++       F + Q  L+QNR LI  +N+N  SR+   VSRNVGLI E+N NI +V+++Y+DLS +F    +      K G
Subjt:  DGETL--SRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG

Q570U6 Protein ELF4-LIKE 42.3e-2155.1Show/hide
Query:  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG
        M+G+ LS    R  +DGK++Q FQ +FV VQ+IL+QNR+LINEINQN ES+    + RNVGLI+ELNNNIRRV  LY DLS SF  S++        G
Subjt:  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG

Q8S8F5 Protein ELF4-LIKE 36.3e-2455.56Show/hide
Query:  MDGETLSR-----GEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAAK
        M+G+T+SR      ++DGK++Q F+ +FVQVQNIL+ NR+LINEINQN ES++   + RNVGLIRELNNN+RRV  LY DLS +F+ S+E    GDS+  
Subjt:  MDGETLSR-----GEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAAK

Query:  PGYKRNRP
         G +R RP
Subjt:  PGYKRNRP

Q94BS8 Protein ELF4-LIKE 21.0e-2156.12Show/hide
Query:  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG
        M+G+  S    R ++DGK++Q FQ +FVQVQ+IL+QNR+LINEINQN ES+ A  + RNVGLIRELNNNIR V  LY DLS SF  S++        G
Subjt:  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 41.6e-2255.1Show/hide
Query:  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG
        M+G+ LS    R  +DGK++Q FQ +FV VQ+IL+QNR+LINEINQN ES+    + RNVGLI+ELNNNIRRV  LY DLS SF  S++        G
Subjt:  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG

AT1G17455.2 ELF4-like 41.6e-2255.1Show/hide
Query:  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG
        M+G+ LS    R  +DGK++Q FQ +FV VQ+IL+QNR+LINEINQN ES+    + RNVGLI+ELNNNIRRV  LY DLS SF  S++        G
Subjt:  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG

AT1G72630.1 ELF4-like 27.2e-2356.12Show/hide
Query:  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG
        M+G+  S    R ++DGK++Q FQ +FVQVQ+IL+QNR+LINEINQN ES+ A  + RNVGLIRELNNNIR V  LY DLS SF  S++        G
Subjt:  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG

AT2G06255.1 ELF4-like 34.5e-2555.56Show/hide
Query:  MDGETLSR-----GEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAAK
        M+G+T+SR      ++DGK++Q F+ +FVQVQNIL+ NR+LINEINQN ES++   + RNVGLIRELNNN+RRV  LY DLS +F+ S+E    GDS+  
Subjt:  MDGETLSR-----GEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAAK

Query:  PGYKRNRP
         G +R RP
Subjt:  PGYKRNRP

AT2G40080.1 Protein of unknown function (DUF1313)4.2e-1545.05Show/hide
Query:  ETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG
        E   +GE D  M +    NF QVQ++L++NR LI ++N N +SRMA  +S+NV LI+ELN NI +VV++Y+DL+TSF++    G +    G
Subjt:  ETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTACAGAGATTTCAAACGAATTTCGTTCAAGTACAGAACATTTTAGAGCAAAACAGAATGTTGAT
CAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAAAGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATG
CTGATCTCTCCACTTCCTTCACCAACTCCATCGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTACAGAGATTTCAAACGAATTTCGTTCAAGTACAGAACATTTTAGAGCAAAACAGAATGTTGAT
CAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAAAGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATG
CTGATCTCTCCACTTCCTTCACCAACTCCATCGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCGTAG
Protein sequenceShow/hide protein sequence
MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP