; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011357 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011357
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCRM domain-containing protein
Genome locationchr01:15998493..16001409
RNA-Seq ExpressionIVF0011357
SyntenyIVF0011357
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148536.1 uncharacterized protein LOC101213060 [Cucumis sativus]9.42e-16389.75Show/hide
Query:  MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK
        M ASIISSHSHS    LLLRS+PSSFSTFFSKPSA AAISTVCFHQFKPSSST LTR+SPH+ RPFTPS  LSFSR FSST+S PSEV FDE DDEIEDK
Subjt:  MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK

Query:  DESDYEDEVEMEDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
        DESDYEDEVEMED VGDG ETGVASELSSP+M+RNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
Subjt:  DESDYEDEVEMEDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE

Query:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINL
        ELEDVVRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR+RK+Y+RKEPDRVKSILQKK+ETP+SSNRGRRGTSR INL
Subjt:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINL

XP_008448058.1 PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]5.28e-18498.59Show/hide
Query:  MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK
        MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAA STVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK
Subjt:  MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK

Query:  DESDYEDEVEMEDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
        DESDYEDEVEMEDSVGDG E GVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
Subjt:  DESDYEDEVEMEDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE

Query:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE
        +LEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE
Subjt:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE

XP_022971306.1 uncharacterized protein LOC111470060 [Cucurbita maxima]4.90e-12976.31Show/hide
Query:  MRASIISSHSHSHS-HSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIED
        M ASI+SS SHSH  HSLLLRSVPSS STF  +PSA   IS  C HQFKP+SS FL R+SPH SR FTPS S+SFSR FSS +SG S V F E DD I+D
Subjt:  MRASIISSHSHSHS-HSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIED

Query:  KDESDYEDEVEMED------SVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
         DESDYEDEVE+ED      +V DG+ET VAS+ SS V++R+EVK+IPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
Subjt:  KDESDYEDEVEMED------SVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  ILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY
        +LGNCP ELEDVVR+LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRR+RKIY+RKEPDRVK  LQ KV+TPRSSNRGRRG+SR+
Subjt:  ILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY

XP_023529380.1 uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]1.73e-12874.74Show/hide
Query:  MRASIISSHSHSHS-HSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIED
        M ASI+SS SHSH  HSLLLRSVPSS STF S+PSA  AIS  C HQFKP+SS FL R+SPH SR F+PS S+SFSR FSST+S  S V F E DD I+D
Subjt:  MRASIISSHSHSHS-HSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIED

Query:  KDESDYEDEVEMED------------SVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEAN
         DESDYEDEVE+ED            +V DG+ET VAS+ SS V++R+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEAN
Subjt:  KDESDYEDEVEMED------------SVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEAN

Query:  ELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY
        ELLKIK+LGNCP ELEDVV++LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRR+RK+Y+RKEPDRVK  LQ KV+TPRSSNRGRRG+SR+
Subjt:  ELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY

XP_038888218.1 uncharacterized protein LOC120078082 [Benincasa hispida]5.95e-14582.98Show/hide
Query:  MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK
        M ASIIS HSHS    LLLRSVPSSFSTFFSKPSA AA + VCF+QFKP SS F TR+S H+SR F PS SLSF R F+ST+SGPSE RFDE DDEIED+
Subjt:  MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK

Query:  DESDYEDEVEME--DSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNC
        DESDYEDEVE+E  ++V DGMETGVASELSS ++NRNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNC
Subjt:  DESDYEDEVEME--DSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNC

Query:  PEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY
        PEELED VRKLEESTGSVVVNQIGRTVIIYRPSITKMKAE++KR++RKIY+RKE DRVKSILQ K++TPRSSNRGRRG+SRY
Subjt:  PEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein5.3e-12789.75Show/hide
Query:  MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK
        M ASIIS    SHSHSLLLRS+PSSFSTFFSKPSA AAISTVCFHQFKPSSST LTR+SPH+ RPFTPS  LSFSR FSST+S PSEV FDE DDEIEDK
Subjt:  MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK

Query:  DESDYEDEVEMEDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
        DESDYEDEVEMED VGDG ETGVASELSSP+M+RNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
Subjt:  DESDYEDEVEMEDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE

Query:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINL
        ELEDVVRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR+RK+Y+RKEPDRVKSILQKK+ETP+SSNRGRRGTSR INL
Subjt:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINL

A0A1S3BJF7 uncharacterized protein LOC1034903502.4e-14398.59Show/hide
Query:  MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK
        MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAA STVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK
Subjt:  MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK

Query:  DESDYEDEVEMEDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
        DESDYEDEVEMEDSVGDG E GVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
Subjt:  DESDYEDEVEMEDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE

Query:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE
        +LEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE
Subjt:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE

A0A5D3DFJ1 Putative RNA-binding CRS1 / YhbY domain protein2.0e-81100Show/hide
Query:  METGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVV
        METGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVV
Subjt:  METGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVV

Query:  NQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE
        NQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE
Subjt:  NQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE

A0A6J1C409 uncharacterized protein LOC1110077235.4e-6373.26Show/hide
Query:  ESDYEDEVEM------EDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        +SDYE EV +      E+S+G   +    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKIL
Subjt:  ESDYEDEVEM------EDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETP--RSSNRGRRGTSRY
         NCP EL+D VR+LEESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Subjt:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETP--RSSNRGRRGTSRY

A0A6J1I2Z3 uncharacterized protein LOC1114700601.7e-10176.31Show/hide
Query:  MRASIISSHSHSH-SHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIED
        M ASI+SS SHSH  HSLLLRSVPSS STF  +PS  A IS  C HQFKP+SS FL R+SPH SR FTPS S+SFSR FSS +SG S V F E DD I+D
Subjt:  MRASIISSHSHSH-SHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIED

Query:  KDESDYEDEVEMED------SVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
         DESDYEDEVE+ED      +V DG+ET VAS+ SS V++R+EVK+IPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
Subjt:  KDESDYEDEVEMED------SVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  ILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY
        +LGNCP ELEDVVR+LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRR+RKIY+RKEPDRVK  LQ KV+TPRSSNRGRRG+SR+
Subjt:  ILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY7.6e-0633.33Show/hide
Query:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK5 RNA-binding protein YhbY7.6e-0633.33Show/hide
Query:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK6 RNA-binding protein YhbY7.6e-0633.33Show/hide
Query:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK7 RNA-binding protein YhbY7.6e-0633.33Show/hide
Query:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P54454 Probable RNA-binding protein YqeI1.3e-0839.33Show/hide
Query:  LTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ +L NC E+  DV   L + + S +V  IG T+++Y+ S
Subjt:  LTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.2e-3345.83Show/hide
Query:  STVCFHQFKPSSSTFLTRKSPHYS---------RPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEMEDSVGDGMETGVASELSSP
        S VC    +P S + L RKS H++         RP+   + L   + FSS              DE E +DE +      + +   DG E G  SEL+  
Subjt:  STVCFHQFKPSSSTFLTRKSPHYS---------RPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEMEDSVGDGMETGVASELSSP

Query:  VMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRP
         M  N   +   L+ KEK++LASYAH LG KLKSQLVGKSGVT  +  SF+ETLE NELLK+KI   CP ELED++ +LEE+TGSV V QI RTVI+YRP
Subjt:  VMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRP

Query:  SITKMKAEEEKRRSRK
        S TK+KA+E+K+R+ +
Subjt:  SITKMKAEEEKRRSRK

AT3G01370.1 CRM family member 25.6e-0429.82Show/hide
Query:  GMETGVASELSSPVMNRNEVKN-IPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNC-PEELEDVVRKLEESTGS
        G  TG  S++S+    ++E    +  L+ +E+  L   A  + KK     VG+S V  GLA +     + N L  + + G      +++V+ KL+E TG+
Subjt:  GMETGVASELSSPVMNRNEVKN-IPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNC-PEELEDVVRKLEESTGS

Query:  VVVNQIGRTVIIYR
        ++V+Q    VI+YR
Subjt:  VVVNQIGRTVIIYR

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein6.1e-3540.6Show/hide
Query:  RASIISSHSHSH-SHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK
        R +  +S S +H  H+LL    P S    F +P   +A  +   H+ KP   +F ++  P +      S SL    F  S++  P     +E +DE    
Subjt:  RASIISSHSHSH-SHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK

Query:  DESDYEDEVEMEDSVGD------GMETGVASELSSPVMNRNEVK----------NIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETL
        +E +YEDE E ++          G+E   ASE  S + ++ E            +   L+IKEKKELASYAH LG KLK QLVGKSGVT  +  SF+ETL
Subjt:  DESDYEDEVEMEDSVGD------GMETGVASELSSPVMNRNEVK----------NIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETL

Query:  EANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQK---KVETPRSSNRGRRGTSR
        E NELLK+KI    P+ELED V+ LEE+TGSV V QIGRTVI+YRPS TKMKAE +K+   ++ I +      +   K   +  + R   RGRRG SR
Subjt:  EANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQK---KVETPRSSNRGRRGTSR

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein5.2e-3441.95Show/hide
Query:  RASIISSHSHSH-SHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK
        R +  +S S +H  H+LL    P S    F +P   +A  +   H+ KP   +F ++  P +      S SL    F  S++  P     +E +DE    
Subjt:  RASIISSHSHSH-SHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDK

Query:  DESDYEDEVEMEDSVGD------GMETGVASELSSPVMNRNEVK----------NIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETL
        +E +YEDE E ++          G+E   ASE  S + ++ E            +   L+IKEKKELASYAH LG KLK QLVGKSGVT  +  SF+ETL
Subjt:  DESDYEDEVEMEDSVGD------GMETGVASELSSPVMNRNEVK----------NIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETL

Query:  EANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRK
        E NELLK+KI    P+ELED V+ LEE+TGSV V QIGRTVI+YRPS TKMKAE +K+   ++ I +
Subjt:  EANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRSRKIYIRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGCTTCGATAATCTCCTCTCACTCTCACTCTCACTCTCACTCTCTCCTTCTCCGCTCAGTCCCCTCCTCCTTCTCCACCTTCTTCTCTAAACCCTCCGCCACCGC
CGCCATCTCCACAGTTTGTTTCCATCAATTTAAGCCCAGCAGTTCAACCTTCCTCACTCGCAAGTCTCCTCACTATTCCCGCCCTTTCACTCCCTCCACATCCCTTTCCT
TTTCTCGCTTTTTTTCCTCCACCGTTTCCGGTCCCTCCGAGGTCAGATTTGATGAAGGCGATGATGAAATTGAAGACAAAGACGAAAGTGATTACGAAGATGAAGTTGAA
ATGGAAGATTCCGTTGGGGATGGAATGGAAACCGGTGTGGCTTCGGAGCTGTCTTCGCCGGTTATGAATAGAAATGAAGTGAAGAATATTCCGAGCTTGACGATTAAGGA
GAAGAAGGAGCTGGCATCGTATGCTCATGGTTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGTTTGGCTACTTCTTTCATCGAGACAC
TTGAAGCCAACGAGCTTCTTAAGATCAAAATTCTCGGAAACTGTCCAGAGGAGCTTGAGGATGTGGTTAGGAAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAG
ATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAATGAAAGCTGAGGAAGAAAAACGACGTTCCCGAAAAATTTATATTAGAAAAGAGCCCGATCGAGTCAA
ATCCATTTTGCAGAAGAAAGTAGAAACACCTCGAAGTTCAAACCGTGGTCGTCGTGGAACCAGCAGGTATATTAATCTGGAGTAG
mRNA sequenceShow/hide mRNA sequence
AGGGAAGCAAAAATGAGGGCTTCGATAATCTCCTCTCACTCTCACTCTCACTCTCACTCTCTCCTTCTCCGCTCAGTCCCCTCCTCCTTCTCCACCTTCTTCTCTAAACC
CTCCGCCACCGCCGCCATCTCCACAGTTTGTTTCCATCAATTTAAGCCCAGCAGTTCAACCTTCCTCACTCGCAAGTCTCCTCACTATTCCCGCCCTTTCACTCCCTCCA
CATCCCTTTCCTTTTCTCGCTTTTTTTCCTCCACCGTTTCCGGTCCCTCCGAGGTCAGATTTGATGAAGGCGATGATGAAATTGAAGACAAAGACGAAAGTGATTACGAA
GATGAAGTTGAAATGGAAGATTCCGTTGGGGATGGAATGGAAACCGGTGTGGCTTCGGAGCTGTCTTCGCCGGTTATGAATAGAAATGAAGTGAAGAATATTCCGAGCTT
GACGATTAAGGAGAAGAAGGAGCTGGCATCGTATGCTCATGGTTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGTTTGGCTACTTCTT
TCATCGAGACACTTGAAGCCAACGAGCTTCTTAAGATCAAAATTCTCGGAAACTGTCCAGAGGAGCTTGAGGATGTGGTTAGGAAATTGGAGGAATCAACTGGCTCTGTG
GTGGTGAATCAGATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAATGAAAGCTGAGGAAGAAAAACGACGTTCCCGAAAAATTTATATTAGAAAAGAGCC
CGATCGAGTCAAATCCATTTTGCAGAAGAAAGTAGAAACACCTCGAAGTTCAAACCGTGGTCGTCGTGGAACCAGCAGGTATATTAATCTGGAGTAGGATTCACATCTAG
CAAGTTTATTTTGCAGGAACAAATTTTGAATTTTCATCCCAATGTAAGTTTTGTTCATCCCATTCTTGTTCTTGTAGTTCCAC
Protein sequenceShow/hide protein sequence
MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAISTVCFHQFKPSSSTFLTRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVE
MEDSVGDGMETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQ
IGRTVIIYRPSITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRYINLE