CuGenDBv2

Gene ID	IVF0011372
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ubiquitin carboxyl-terminal hydrolase
Genome location	chr08:12602156..12602314
RNA-Seq Expression	IVF0011372
Synteny	IVF0011372
Gene Ontology terms	GO:0016579 - protein deubiquitination (biological process) GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process) GO:0061136 - regulation of proteasomal protein catabolic process (biological process) GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function) GO:0070628 - proteasome binding (molecular function)
InterPro domains	IPR029071 - Ubiquitin-like domain superfamily IPR044635 - Ubiquitin carboxyl-terminal hydrolase 14-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0059444.1 ubiquitin carboxyl-terminal hydrolase 6 [Cucumis melo var. makuwa]

5.69e-21

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Query:  MVSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        ++SVKWQKELFRDVEIDTSLPPY  KGQLF+LTGVPPERQKIM+KG ILK
Subjt:  MVSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

KAG7014028.1 Ubiquitin carboxyl-terminal hydrolase 7 [Cucurbita argyrosperma subsp. argyrosperma]

1.23e-20

87.76

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQKELF+DVEIDTSLPPY  KGQLF+LTGVPPERQKIM+KG ILK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

XP_004141674.1 ubiquitin carboxyl-terminal hydrolase 6 [Cucumis sativus]

3.73e-21

89.8

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQKELFRDVEIDTSLPPY  KGQLF+LTGVPPERQKIM+KG ILK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

XP_008462369.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 [Cucumis melo]

3.73e-21

89.8

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQKELFRDVEIDTSLPPY  KGQLF+LTGVPPERQKIM+KG ILK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

XP_038899831.1 ubiquitin carboxyl-terminal hydrolase 6 [Benincasa hispida]

9.70e-21

87.76

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQKELFRDVEIDTSLPPY  KGQL++LTGVPPERQKIM+KG ILK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9N4 Ubiquitin carboxyl-terminal hydrolase

2.0e-16

89.8

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQKELFRDVEIDTSLPPY  KGQLF+LTGVPPERQKIM+KG ILK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

A0A1S3CIC3 Ubiquitin carboxyl-terminal hydrolase

2.0e-16

89.8

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQKELFRDVEIDTSLPPY  KGQLF+LTGVPPERQKIM+KG ILK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

A0A5D3BXK7 Ubiquitin carboxyl-terminal hydrolase

2.6e-16

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Query:  MVSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        ++SVKWQKELFRDVEIDTSLPPY  KGQLF+LTGVPPERQKIM+KG ILK
Subjt:  MVSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

A0A6J1GND5 Ubiquitin carboxyl-terminal hydrolase

5.9e-16

87.76

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQKELF+DVEIDTSLPPY  KGQLF+LTGVPPERQKIM+KG ILK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

A0A6J1KI38 Ubiquitin carboxyl-terminal hydrolase

1.0e-15

87.76

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQKEL RDVEIDTSLPPY  KGQLF+LTGVPPERQKIM+KG ILK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

SwissProt top hits

e value

%identity

Alignment

P54578 Ubiquitin carboxyl-terminal hydrolase 14

1.8e-09

59.18

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        V+VKW KE F  VE++T  PP   K QLF LTGV P RQK+M+KG  LK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

Q0IIF7 Ubiquitin carboxyl-terminal hydrolase 14

1.8e-09

59.18

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        V+VKW KE F  VE++T  PP   K QLF LTGV P RQK+M+KG  LK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

Q84WC6 Ubiquitin carboxyl-terminal hydrolase 7

1.2e-13

67.35

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQK++F  +EIDTS PP+  K QL+ L+GVPPERQKIM+KG +LK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

Q949Y0 Ubiquitin carboxyl-terminal hydrolase 6

1.2e-13

69.39

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQK++   +EID SLPPY  K QL+ LTGVPPERQKIM+KG +LK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

Q9JMA1 Ubiquitin carboxyl-terminal hydrolase 14

1.8e-09

59.18

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        V+VKW KE F  VE++T  PP   K QLF LTGV P RQK+M+KG  LK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

Arabidopsis top hits

e value

%identity

Alignment

AT1G51710.1 ubiquitin-specific protease 6

8.4e-15

69.39

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQK++   +EID SLPPY  K QL+ LTGVPPERQKIM+KG +LK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

AT3G21280.1 ubiquitin-specific protease 7

8.4e-15

67.35

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Query:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK
        VSVKWQK++F  +EIDTS PP+  K QL+ L+GVPPERQKIM+KG +LK
Subjt:  VSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILK

Sequences

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CDS sequence

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ATGGTGAGTGTAAAGTGGCAAAAAGAGTTGTTTCGTGATGTTGAAATTGATACCAGTCTGCCCCCATATTATTTGAAAGGCCAGTTGTTTAAACTCACCGGTGTGCCTCC
TGAACGGCAGAAGATTATGATTAAGGGTTGTATACTAAAGGTTACTTGA

mRNA sequence

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ATGGTGAGTGTAAAGTGGCAAAAAGAGTTGTTTCGTGATGTTGAAATTGATACCAGTCTGCCCCCATATTATTTGAAAGGCCAGTTGTTTAAACTCACCGGTGTGCCTCC
TGAACGGCAGAAGATTATGATTAAGGGTTGTATACTAAAGGTTACTTGA

Protein sequence

Show/hide protein sequence

MVSVKWQKELFRDVEIDTSLPPYYLKGQLFKLTGVPPERQKIMIKGCILKVT

IVF0011372 (gene) of Melon (IVF77) v1 genome