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IVF0011382 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011382
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionZinc finger, CCHC-type
Genome locationchr02:2129782..2130192
RNA-Seq ExpressionIVF0011382
SyntenyIVF0011382
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050409.1 hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa]1.69e-7390.62Show/hide
Query:  LMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEVWDALQKKY
        LMSSD NRPFRFEGA+FKRWKQKMLFFLTLKKV TACTTEK KV EKDPT+EQLKNL TWTETDFICKNLILNGLTDELYDYYSTMTTAK+VW+ALQKKY
Subjt:  LMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEVWDALQKKY

Query:  DTEEAGSKKYAVSRYLIYQMIDDKSVEA
        DTEEAGSKKYAVSRYL YQM DD+SVEA
Subjt:  DTEEAGSKKYAVSRYLIYQMIDDKSVEA

KAA0055814.1 hypothetical protein E6C27_scaffold181G002040 [Cucumis melo var. makuwa]3.70e-93100Show/hide
Query:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
        MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
Subjt:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV

Query:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA
        WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA
Subjt:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA

KAA0058200.1 uncharacterized protein E6C27_scaffold274G005210 [Cucumis melo var. makuwa]2.95e-8289.71Show/hide
Query:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
        MA +IQSDLMS D NRPFRFEGA+FKRWKQKMLFFLTLKKV TACTTEK +VLEKDPTE+QLKNL TWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
Subjt:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV

Query:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA
        WDALQKKYDTEEA SKKYA+SRYL YQM DDKSVEA
Subjt:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]6.23e-8291.18Show/hide
Query:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
        MA +IQSDLMSSD NR FRFEGA+FKRWKQK+LFFLTLKKV TACTTEK KV EKDPTEEQLKNL TWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
Subjt:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV

Query:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA
        WDALQKKYDTEEAGSKKYAVSRYL YQM DDKSVEA
Subjt:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA

KAA0065374.1 uncharacterized protein E6C27_scaffold17G00360 [Cucumis melo var. makuwa]4.51e-7488.89Show/hide
Query:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
        M  +IQSDLMSSD NRPFRFEGA+FKRWKQKMLFFLTLKKV TACTTEK KV EKDP EEQLKNL TWTETDFICKNLILNGLTDELYDYYSTMTT KEV
Subjt:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV

Query:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVE
        WDALQKKYDT+EA SKKYAVSRYL YQM DDKSVE
Subjt:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVE

TrEMBL top hitse value%identityAlignment
A0A5A7UA92 Uncharacterized protein2.9e-5990.62Show/hide
Query:  LMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEVWDALQKKY
        LMSSD NRPFRFEGA+FKRWKQKMLFFLTLKKV TACTTEK KV EKDPT+EQLKNL TWTETDFICKNLILNGLTDELYDYYSTMTTAK+VW+ALQKKY
Subjt:  LMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEVWDALQKKY

Query:  DTEEAGSKKYAVSRYLIYQMIDDKSVEA
        DTEEAGSKKYAVSRYL YQM DD+SVEA
Subjt:  DTEEAGSKKYAVSRYLIYQMIDDKSVEA

A0A5A7USR3 Uncharacterized protein3.7e-6289.71Show/hide
Query:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
        MA +IQSDLMS D NRPFRFEGA+FKRWKQKMLFFLTLKKV TACTTEK +VLEKDPTE+QLKNL TWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
Subjt:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV

Query:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA
        WDALQKKYDTEEA SKKYA+SRYL YQM DDKSVEA
Subjt:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA

A0A5A7UYY4 Uncharacterized protein1.3e-6291.18Show/hide
Query:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
        MA +IQSDLMSSD NR FRFEGA+FKRWKQK+LFFLTLKKV TACTTEK KV EKDPTEEQLKNL TWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
Subjt:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV

Query:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA
        WDALQKKYDTEEAGSKKYAVSRYL YQM DDKSVEA
Subjt:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA

A0A5D3CEV3 Uncharacterized protein2.2e-70100Show/hide
Query:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
        MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
Subjt:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV

Query:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA
        WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA
Subjt:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVEA

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein1.6e-6088.89Show/hide
Query:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV
        M  +IQSDLMSSD NRPFRFEGA+FKRWKQKMLFFLTLKKV TACTTEK KV EKDP EEQLKNL TWTETDFICKNLILNGLTDELYDYYSTMTT KEV
Subjt:  MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEV

Query:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVE
        WDALQKKYDT+EA SKKYAVSRYL YQM DDKSVE
Subjt:  WDALQKKYDTEEAGSKKYAVSRYLIYQMIDDKSVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein1.0e-0829.03Show/hide
Query:  RFEGAYFKRWKQKMLFFLTLKKVTTACTTE-----KSKVLEKDPTEEQLKNLV--TWTETDFICKNLILNGLTDELYDYYS-TMTTAKEVWDALQKKYDT
        RF+G  +  W  +M  FL   K+T   +        S+  E +P E    +     W   D++C   ++N L+D LY  YS     AKE+WD L+  Y  
Subjt:  RFEGAYFKRWKQKMLFFLTLKKVTTACTTE-----KSKVLEKDPTEEQLKNLV--TWTETDFICKNLILNGLTDELYDYYS-TMTTAKEVWDALQKKYDT

Query:  EEAGSKKYAVSRYLIYQMIDDKSV
        +E+ SK+  V +Y+ ++M++++ +
Subjt:  EEAGSKKYAVSRYLIYQMIDDKSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAAAAATTCAATCCGACTTGATGTCTTCTGATTTCAACCGTCCGTTCCGTTTTGAAGGAGCATACTTCAAAAGGTGGAAACAAAAGATGTTATTTTTTCTCAC
ACTAAAGAAGGTGACCACTGCTTGTACTACTGAAAAGTCGAAGGTTTTAGAAAAAGATCCTACAGAAGAACAACTAAAGAACCTCGTCACCTGGACAGAAACTGACTTCA
TCTGTAAGAACCTAATTCTTAATGGTCTTACTGATGAACTATATGATTATTACAGTACCATGACTACTGCAAAAGAAGTATGGGACGCGCTACAAAAGAAGTACGATACT
GAAGAAGCGGGGTCGAAGAAGTACGCTGTCAGCCGATACCTGATATATCAAATGATCGATGACAAATCCGTGGAGGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAAAAATTCAATCCGACTTGATGTCTTCTGATTTCAACCGTCCGTTCCGTTTTGAAGGAGCATACTTCAAAAGGTGGAAACAAAAGATGTTATTTTTTCTCAC
ACTAAAGAAGGTGACCACTGCTTGTACTACTGAAAAGTCGAAGGTTTTAGAAAAAGATCCTACAGAAGAACAACTAAAGAACCTCGTCACCTGGACAGAAACTGACTTCA
TCTGTAAGAACCTAATTCTTAATGGTCTTACTGATGAACTATATGATTATTACAGTACCATGACTACTGCAAAAGAAGTATGGGACGCGCTACAAAAGAAGTACGATACT
GAAGAAGCGGGGTCGAAGAAGTACGCTGTCAGCCGATACCTGATATATCAAATGATCGATGACAAATCCGTGGAGGCATAG
Protein sequenceShow/hide protein sequence
MAEKIQSDLMSSDFNRPFRFEGAYFKRWKQKMLFFLTLKKVTTACTTEKSKVLEKDPTEEQLKNLVTWTETDFICKNLILNGLTDELYDYYSTMTTAKEVWDALQKKYDT
EEAGSKKYAVSRYLIYQMIDDKSVEA