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IVF0011410 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011410
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosystem II reaction center protein Z
Genome locationchr10:26510794..26510982
RNA-Seq ExpressionIVF0011410
SyntenyIVF0011410
Gene Ontology termsGO:0042549 - photosystem II stabilization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002644 - Photosystem II PsbZ, reaction centre
IPR036512 - Photosystem II PsbZ superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_004841780.1 photosystem II protein Z [Cucumis melo subsp. melo]6.80e-2896.77Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  EGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
YP_009004041.1 photosystem II protein Z [Cucumis hystrix]1.95e-2795.16Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  +GWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
YP_009430624.1 photosystem II protein z [Gynostemma cardiospermum]2.77e-2793.55Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVP+VFA  +GWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
YP_009751987.1 photosystem II subunit Z [Cionosicys macranthus]2.77e-2793.55Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  +GWSGNKN+VFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
YP_010144251.1 photosystem II reaction center Z protein [Poikilospermum lanceolatum]2.77e-2793.55Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  +GWSGNKNVVFSGTSLWIGLVFL+GILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
TrEMBL top hitse value%identityAlignment
A0A1S4EU04 Photosystem II reaction center protein Z6.1e-2096.77Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  EGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
A0A249RXJ9 Photosystem II reaction center protein Z6.1e-2096.77Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  EGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
A0A249RZ13 Photosystem II reaction center protein Z6.1e-2096.77Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  EGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
A0A249RZC1 Photosystem II reaction center protein Z6.1e-2096.77Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  EGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
A0A286NG07 Photosystem II reaction center protein Z6.1e-2096.77Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  EGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
SwissProt top hitse value%identityAlignment
P56790 Photosystem II reaction center protein Z2.4e-2191.94Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI+TSSILLISVPVVFA  +GWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Q09MI1 Photosystem II reaction center protein Z5.3e-2191.94Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI TSSILLISVPVVFA  +GWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Q32902 Photosystem II reaction center protein Z1.8e-2193.55Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  +GWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Q4VZN6 Photosystem II reaction center protein Z3.7e-2295.16Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFA  +GWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Q9MTN5 Photosystem II reaction center protein Z4.1e-2191.94Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI TSS+LLISVPVVFA  EGWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Arabidopsis top hitse value%identityAlignment
ATCG00300.1 YCF91.7e-2291.94Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI+TSSILLISVPVVFA  +GWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTAATTAGTGTGCCCGTTGTATTTGCTTTTCTTGAAGGTTGGTCGGGTAACAA
AAATGTTGTATTTTCCGGTACATCATTATGGATTGGATTAGTCTTTCTGGTTGGTATCCTTAATTCTCTTATCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTAATTAGTGTGCCCGTTGTATTTGCTTTTCTTGAAGGTTGGTCGGGTAACAA
AAATGTTGTATTTTCCGGTACATCATTATGGATTGGATTAGTCTTTCTGGTTGGTATCCTTAATTCTCTTATCTCTTGA
Protein sequenceShow/hide protein sequence
MTIAFQLAVFALIVTSSILLISVPVVFAFLEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS