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IVF0011416 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011416
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase
Genome locationchr11:6761239..6761592
RNA-Seq ExpressionIVF0011416
SyntenyIVF0011416
Gene Ontology termsGO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051601.1 integrase [Cucumis melo var. makuwa]1.52e-0666.67Show/hide
Query:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRS
        MGS QSHE RLK FD  P EEAF MQ+S++G S GRRGGH RR  GR+
Subjt:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRS

KAA0058944.1 hypothetical protein E6C27_scaffold98G001240 [Cucumis melo var. makuwa]3.56e-1168.63Show/hide
Query:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVI
        MGS QSHE RLKLFDSTPS+E FHMQSS +G  GGRRGG   R NG+S ++
Subjt:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVI

TYK10980.1 hypothetical protein E5676_scaffold874G00100 [Cucumis melo var. makuwa]3.56e-1168.63Show/hide
Query:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVI
        MGS QSHE RLKLFDSTPS+E FHMQSS +G  GGRRGG   R NG+S ++
Subjt:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVI

XP_038877452.1 uncharacterized protein LOC120069734 [Benincasa hispida]1.10e-3679.41Show/hide
Query:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVITNKSQRVETINLLQLKEEEEVQIEEEAEVVVVEIFLTYNVSIVDVMDIF
        MGS QSHE RLKLFDS P E+AFHMQSS +G SGGRR G   R NGRSNV+T  SQR ETINLLQ++E EEVQIE+EAEVVVVEIFLTYNVSIVDVMDIF
Subjt:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVITNKSQRVETINLLQLKEEEEVQIEEEAEVVVVEIFLTYNVSIVDVMDIF

Query:  KQ
        KQ
Subjt:  KQ

XP_038904397.1 uncharacterized protein LOC120090760 [Benincasa hispida]1.29e-0666.67Show/hide
Query:  KSQRVETINLLQLKEEEEVQIEEEAEVVVVEIFLTYNVSIVDVMDIFK
        +S R +TI LLQ++E+ +VQ+EEEAEV VV+IFLTYNVSIV+VM IF+
Subjt:  KSQRVETINLLQLKEEEEVQIEEEAEVVVVEIFLTYNVSIVDVMDIFK

TrEMBL top hitse value%identityAlignment
A0A5A7UDJ2 Integrase2.1e-0566.67Show/hide
Query:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRS
        MGS QSHE RLK FD  P EEAF MQ+S++G S GRRGGH RR  GR+
Subjt:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRS

A0A5A7UV00 Uncharacterized protein3.5e-0868.63Show/hide
Query:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVI
        MGS QSHE RLKLFDSTPS+E FHMQSS +G  GGRRGG   R NG+S ++
Subjt:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVI

A0A5A7V047 Integrase2.1e-0566.67Show/hide
Query:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRS
        MGS QSHE RLK FD  P EEAF MQ+S++G S GRRGGH RR  GR+
Subjt:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRS

A0A5D3CHY9 Uncharacterized protein3.5e-0868.63Show/hide
Query:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVI
        MGS QSHE RLKLFDSTPS+E FHMQSS +G  GGRRGG   R NG+S ++
Subjt:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVI

A0A5D3CLV1 Integrase3.6e-0566.67Show/hide
Query:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRS
        MGS QSHE RLK FD  P EEAF MQ+S++G S GRRGGH RR  GR+
Subjt:  MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCTCCTCAATCTCATGAGCACAGATTGAAGTTGTTTGATTCTACTCCTTCAGAAGAAGCTTTTCATATGCAATCCTCTTATAAAGGGTCATCTGGTGGAAGAAG
AGGTGGACATAGTCGTAGAAGCAATGGAAGATCCAACGTCATAACAAATAAGAGTCAGAGAGTAGAGACAATCAATCTTCTTCAACTAAAGGAAGAGGAAGAAGTTCAAA
TAGAGGAAGAGGCAGAAGTGGTGGTCGTGGAGATTTTTCTCACATACAATGTTTCAATTGTAGACGTTATGGACATTTTCAAGCAGATTGTTGAACTAAAAAGGCTAATT
CTAATAAAGCAGAAACCACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCTCCTCAATCTCATGAGCACAGATTGAAGTTGTTTGATTCTACTCCTTCAGAAGAAGCTTTTCATATGCAATCCTCTTATAAAGGGTCATCTGGTGGAAGAAG
AGGTGGACATAGTCGTAGAAGCAATGGAAGATCCAACGTCATAACAAATAAGAGTCAGAGAGTAGAGACAATCAATCTTCTTCAACTAAAGGAAGAGGAAGAAGTTCAAA
TAGAGGAAGAGGCAGAAGTGGTGGTCGTGGAGATTTTTCTCACATACAATGTTTCAATTGTAGACGTTATGGACATTTTCAAGCAGATTGTTGAACTAAAAAGGCTAATT
CTAATAAAGCAGAAACCACTCTAA
Protein sequenceShow/hide protein sequence
MGSPQSHEHRLKLFDSTPSEEAFHMQSSYKGSSGGRRGGHSRRSNGRSNVITNKSQRVETINLLQLKEEEEVQIEEEAEVVVVEIFLTYNVSIVDVMDIFKQIVELKRLI
LIKQKPL