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IVF0011428 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011428
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionglucose-induced degradation protein 8 homolog
Genome locationchr04:4110746..4114486
RNA-Seq ExpressionIVF0011428
SyntenyIVF0011428
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006594 - LIS1 homology motif
IPR006595 - CTLH, C-terminal LisH motif
IPR024964 - CTLH/CRA C-terminal to LisH motif domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063230.1 glucose-induced degradation protein 8-like protein [Cucumis melo var. makuwa]7.36e-83100Show/hide
Query:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
        MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
Subjt:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV

Query:  ELVCSRKCTEALEFAQVKLAPFG
        ELVCSRKCTEALEFAQVKLAPFG
Subjt:  ELVCSRKCTEALEFAQVKLAPFG

XP_004147845.1 glucose-induced degradation protein 8 homolog [Cucumis sativus]1.14e-8198.37Show/hide
Query:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
        MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLK HTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEK EDLHFDLLSLHFV
Subjt:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV

Query:  ELVCSRKCTEALEFAQVKLAPFG
        ELVCSRKCTEALEFAQVKLAPFG
Subjt:  ELVCSRKCTEALEFAQVKLAPFG

XP_008466517.1 PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis melo]8.43e-84100Show/hide
Query:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
        MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
Subjt:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV

Query:  ELVCSRKCTEALEFAQVKLAPFG
        ELVCSRKCTEALEFAQVKLAPFG
Subjt:  ELVCSRKCTEALEFAQVKLAPFG

XP_022131820.1 glucose-induced degradation protein 8 homolog [Momordica charantia]7.23e-7892.68Show/hide
Query:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
        MDVDPRHYD+ A++DGDIQNIVLSYLVHNCYKETAESFT CTGLKQHTDYLVDM KRKRIYDFA+EGNALKAIELTEE+A GLLEKNEDLHFDLLSLHFV
Subjt:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV

Query:  ELVCSRKCTEALEFAQVKLAPFG
        ELVCSRKCTEALEFAQVKLAPFG
Subjt:  ELVCSRKCTEALEFAQVKLAPFG

XP_038897027.1 glucose-induced degradation protein 8 homolog [Benincasa hispida]8.02e-8298.37Show/hide
Query:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
        MDVDPRHYD+IAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVA GLLEKNEDLHFDLLSLHFV
Subjt:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV

Query:  ELVCSRKCTEALEFAQVKLAPFG
        ELVCSRKCTEALEFAQVKLAPFG
Subjt:  ELVCSRKCTEALEFAQVKLAPFG

TrEMBL top hitse value%identityAlignment
A0A0A0LJ37 Uncharacterized protein1.5e-6298.37Show/hide
Query:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
        MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLK HTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEK EDLHFDLLSLHFV
Subjt:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV

Query:  ELVCSRKCTEALEFAQVKLAPFG
        ELVCSRKCTEALEFAQVKLAPFG
Subjt:  ELVCSRKCTEALEFAQVKLAPFG

A0A1S3CRF7 glucose-induced degradation protein 8 homolog3.6e-64100Show/hide
Query:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
        MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
Subjt:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV

Query:  ELVCSRKCTEALEFAQVKLAPFG
        ELVCSRKCTEALEFAQVKLAPFG
Subjt:  ELVCSRKCTEALEFAQVKLAPFG

A0A5A7V7L0 Glucose-induced degradation protein 8-like protein3.6e-64100Show/hide
Query:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
        MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
Subjt:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV

Query:  ELVCSRKCTEALEFAQVKLAPFG
        ELVCSRKCTEALEFAQVKLAPFG
Subjt:  ELVCSRKCTEALEFAQVKLAPFG

A0A6J1BQR5 glucose-induced degradation protein 8 homolog1.2e-5992.68Show/hide
Query:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
        MDVDPRHYD+ A++DGDIQNIVLSYLVHNCYKETAESFT CTGLKQHTDYLVDM KRKRIYDFA+EGNALKAIELTEE+A GLLEKNEDLHFDLLSLHFV
Subjt:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV

Query:  ELVCSRKCTEALEFAQVKLAPFG
        ELVCSRKCTEALEFAQVKLAPFG
Subjt:  ELVCSRKCTEALEFAQVKLAPFG

A0A6J1FII7 glucose-induced degradation protein 8 homolog isoform X14.7e-5690.24Show/hide
Query:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV
        MDVDPRHYD+IA+NDGD+QNIVLSYLVHNCYKETAESFT  TGLKQ TD +V M KRKRIYDFAVEGNALKAIELTEEVA GLLEKNE LHFDLLSLHFV
Subjt:  MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFV

Query:  ELVCSRKCTEALEFAQVKLAPFG
        ELVCSRKCTEALEFAQVKLAPFG
Subjt:  ELVCSRKCTEALEFAQVKLAPFG

SwissProt top hitse value%identityAlignment
A1L252 Ran-binding protein 94.1e-0940.7Show/hide
Query:  IQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELV
        IQ +V SYLVH+ Y  TAE+F   T    H + L  +  R++I    + G   +AIE T+++ P LLE+N DL F L    F+E+V
Subjt:  IQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELV

Q28FM1 Ran-binding protein 96.0e-0839.53Show/hide
Query:  IQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELV
        IQ +V SYLVH+ Y  TAE+F   T  +   + L  +  R+RI    + G   +AIE T+++ P LLE+N +L F L    F+E+V
Subjt:  IQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELV

Q54X16 Glucose-induced degradation protein 8 homolog1.6e-0831.86Show/hide
Query:  IAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTE
        + ++  D+  +V++YLV   Y+E A  F   +  +   D L  +A R  I      G+  K IE+  ++ P +L+ N  L+F L     +EL+      E
Subjt:  IAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTE

Query:  ALEFAQVKLAPFG
        AL+FAQ +LAP G
Subjt:  ALEFAQVKLAPFG

Q84WK5 Protein GID8 homolog4.9e-1036.45Show/hide
Query:  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQ
        D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE   ++ P +L+ N +L F L     +EL+   K  EALEFAQ
Subjt:  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQ

Query:  VKLAPFG
         +LAP G
Subjt:  VKLAPFG

Q9PTY5 Ran-binding protein 96.0e-0839.53Show/hide
Query:  IQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELV
        IQ +V SYLVH+ Y  TAE+F   T  +   + L  +  R+RI    + G   +AIE T+++ P LLE+N +L F L    F+E+V
Subjt:  IQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELV

Arabidopsis top hitse value%identityAlignment
AT1G06060.1 LisH and RanBPM domains containing protein3.8e-3455.37Show/hide
Query:  VDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVEL
        +DPR +++  V D DI +IV+SYL+HNC+ ETA+S  + TG+KQ      +M +RK+I  F +E  ALKA ELTE++A  LLEKN+DL FDLL LHFVEL
Subjt:  VDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVEL

Query:  VCSRKCTEALEFAQVKLAPFG
        +C+  CTEAL+F + +LAPFG
Subjt:  VCSRKCTEALEFAQVKLAPFG

AT1G61150.1 LisH and RanBPM domains containing protein3.5e-1136.45Show/hide
Query:  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQ
        D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE   ++ P +L+ N +L F L     +EL+   K  EALEFAQ
Subjt:  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQ

Query:  VKLAPFG
         +LAP G
Subjt:  VKLAPFG

AT1G61150.2 LisH and RanBPM domains containing protein3.5e-1136.45Show/hide
Query:  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQ
        D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE   ++ P +L+ N +L F L     +EL+   K  EALEFAQ
Subjt:  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQ

Query:  VKLAPFG
         +LAP G
Subjt:  VKLAPFG

AT1G61150.4 LisH and RanBPM domains containing protein3.5e-1136.45Show/hide
Query:  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQ
        D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE   ++ P +L+ N +L F L     +EL+   K  EALEFAQ
Subjt:  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQ

Query:  VKLAPFG
         +LAP G
Subjt:  VKLAPFG

AT1G61150.5 LisH and RanBPM domains containing protein3.5e-1136.45Show/hide
Query:  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQ
        D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE   ++ P +L+ N +L F L     +EL+   K  EALEFAQ
Subjt:  DIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQ

Query:  VKLAPFG
         +LAP G
Subjt:  VKLAPFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTCGATCCTCGCCACTACGACAACATCGCTGTGAACGATGGTGATATCCAGAACATTGTTCTATCGTACCTTGTTCATAATTGTTATAAAGAAACTGCAGAGTC
GTTCACTACCTGTACTGGGCTTAAGCAGCACACGGATTATCTCGTCGACATGGCAAAAAGAAAAAGAATTTATGATTTTGCAGTAGAAGGGAATGCACTTAAGGCCATTG
AGTTAACGGAGGAGGTGGCACCTGGTCTACTTGAGAAGAATGAGGACCTTCATTTTGATCTTTTAAGCCTTCATTTTGTTGAACTTGTTTGCTCAAGGAAATGCACAGAG
GCCCTGGAATTTGCTCAGGTCAAGCTTGCTCCTTTTGGAAGTTGCATAAATACGTGGAAAAACTTGAAGATTTCATGGCCCTCCTTGCCTATGAAGAACCAGAGAAGTCT
CCAATGTTTCATCTGCTTAGCGTGGATTACCGGCAAAGAGTAG
mRNA sequenceShow/hide mRNA sequence
GTAGTTTTCGCCGGAGCGCGTTAACAAAACTTGCGGTAAAAAAAAGGAAAAGGAAAACTGAGCATCGGGCTGCAAAACCAAAAATTCCGATACCGAGTCGGATCATTTTC
ATTTTCGTACCGCGCAAGTCCAAGACGAAGAGGGCCGATTTGAGAGATCGAACTCCATGAAACTTCTTCCTCCTCATCGCAACGCCCACTCCCGAATCGTACTCCTCTCC
TTCTCCTCCGCCTCCGCTCTCTTAACTTAGCCTCTCAATCACTTCAACTCCTTTATTTCTCGCCGGCCGACGACCAATCATGGACGTCGATCCTCGCCACTACGACAACA
TCGCTGTGAACGATGGTGATATCCAGAACATTGTTCTATCGTACCTTGTTCATAATTGTTATAAAGAAACTGCAGAGTCGTTCACTACCTGTACTGGGCTTAAGCAGCAC
ACGGATTATCTCGTCGACATGGCAAAAAGAAAAAGAATTTATGATTTTGCAGTAGAAGGGAATGCACTTAAGGCCATTGAGTTAACGGAGGAGGTGGCACCTGGTCTACT
TGAGAAGAATGAGGACCTTCATTTTGATCTTTTAAGCCTTCATTTTGTTGAACTTGTTTGCTCAAGGAAATGCACAGAGGCCCTGGAATTTGCTCAGGTCAAGCTTGCTC
CTTTTGGAAGTTGCATAAATACGTGGAAAAACTTGAAGATTTCATGGCCCTCCTTGCCTATGAAGAACCAGAGAAGTCTCCAATGTTTCATCTGCTTAGCGTGGATTACC
GGCAAAGAGTAGCAGAAAGTCTAAATCGAGCAATTCTTGCACATGGAAATTTGCCGAGCTATACAGCAATGGAAAGGCTGATAAAGCAGGTGACTGTAGTTAGACAGTCC
TTGAGCCAAGAGCTGGGCAAGGATGGGTTTCAATCATTTTCTTTGAGGGATTTTCTGAAAAGCTGATCCAAAGAGTTCGTTTAGGCTTACAGCACTGAGATACAACCAGC
TCCAAATCTTGTTGCCACCCATGGCTGGGTATGGAAGATTGTTGCTCTCTTCACATGCCTTCGGTGCCTTGTAGGCCAAAAACCGAGTCATCTAGGTCCCTCGAGCAAAA
GTTCGTTTCTTTTCAGTTTGGTGACCTCGTTGTGCCAGTGGCTTGCTTGTATTGTGATTGTACATGCTGTCTCTAATTTTGCTGCTTGCCCTATTTTCCCCCTTTTTTAT
TTTTCAAAATTTTTAATGTATGGAGAAATTGGCTAACATTATTTTGTCTCATAGTCATGGTACGGTTTTGGCACGGAGGAACTCTACTTTGTTGGTATCTGCGATATGGT
CGGATGTGAGCTTTGTTTGTCAATGTATCTAAGGAG
Protein sequenceShow/hide protein sequence
MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRIYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTE
ALEFAQVKLAPFGSCINTWKNLKISWPSLPMKNQRSLQCFICLAWITGKE