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IVF0011430 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011430
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCytochrome b559 subunit alpha
Genome locationtig00000662:88199..89401
RNA-Seq ExpressionIVF0011430
SyntenyIVF0011430
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR006216 - Photosystem II cytochrome b559, conserved site
IPR006217 - Photosystem II cytochrome b559, alpha subunit
IPR013081 - Photosystem II cytochrome b559, N-terminal
IPR013082 - Photosystem II cytochrome b559, alpha subunit, lumenal region
IPR037025 - Photosystem II cytochrome b559, alpha subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QBS31917.1 cytochrome b559 alpha chain [Dipteronia sinensis]4.54e-53100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
QFQ47648.1 photosystem II cytochrome b559 alpha subunit [Anerincleistus bullatus]3.56e-53100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
VDD65777.1 unnamed protein product [Brassica oleracea]4.27e-53100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
WP_042854921.1 MULTISPECIES: cytochrome b559 subunit alpha [Terrabacteria group]3.35e-53100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
YP_009164517.1 photosystem II cytochrome b559 alpha subunit [Sedum oryzifolium]4.76e-5398.8Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPL+TGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
TrEMBL top hitse value%identityAlignment
A0A0U2T221 Cytochrome b559 subunit alpha1.2e-39100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
A0A1U9YE75 Cytochrome b559 subunit alpha1.2e-39100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
A0A1X9QHD2 Cytochrome b559 subunit alpha1.2e-39100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
A0A1Z1CEE6 Cytochrome b559 subunit alpha1.2e-39100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
A0A218KG52 Cytochrome b559 subunit alpha1.2e-39100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
SwissProt top hitse value%identityAlignment
P56779 Cytochrome b559 subunit alpha3.3e-42100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
P59702 Cytochrome b559 subunit alpha3.3e-42100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
P69382 Cytochrome b559 subunit alpha3.3e-42100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Q4VZH5 Cytochrome b559 subunit alpha3.3e-42100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Q70XY9 Cytochrome b559 subunit alpha3.3e-42100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Arabidopsis top hitse value%identityAlignment
ATCG00580.1 photosystem II reaction center protein E8.9e-4398.8Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFD LEQLDEFSRSF
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTGATATTATCACCAGTATTCGATACTGGGTCATTCATAGCATTACTATACCTTCTCTATTCATTGCAGGTTGGTTATT
CGTCAGCACGGGTTTAGCTTACGATGTTTTTGGAAGCCCTCGTCCAAATGAGTATTTTACAGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTTTTGATTCTTTGG
AACAACTCGATGAATTTAGTAGATCTTTTTAG
mRNA sequenceShow/hide mRNA sequence
TTTCGAGATTTCACGTCTAATTTCATTGAATTTTGGGACTATTAGAATCTGCTTCCTAAATTATTATAAACCAACCAGTCGGATTCACATTTTACCCAATCTTCGCTTTC
TAGCCCGAAGCCAATAACCGATAGAATCCTTAATACTACAGACAGGCATTTTCAGAATTTTCTATTGAATGAATGGTATATGATTCTACATCGACAAGCAGCAAGAAAAG
AAGAAACAAATTATATTATTTAGTTTTAGTGCTTCATTTTGATACTTATTGTGAAATTGCGTTGCTGCGTCAGAAGAAGGATAGCTATACTGATTCGGTATACTCTAAAA
ACACCCTCGGTACAATATTGACGATCTTACAAAGATAAAATTTCAGTTAATTTCCATTTACTGATCTCATCTTTTACGGAATCGATCCCCCTTTTGACTGTACAAGAATA
TGTGGAGCTCGGCATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTGATATTATCACCAGTATTCGATACTGGGTCATTCATAGCATTACTATACCTTCTCTATTCATTG
CAGGTTGGTTATTCGTCAGCACGGGTTTAGCTTACGATGTTTTTGGAAGCCCTCGTCCAAATGAGTATTTTACAGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGT
TTTGATTCTTTGGAACAACTCGATGAATTTAGTAGATCTTTTTAGGAGGACCAAATGACTATCGATAAAACTTATCCTATTTTTACAGTGCGATGGTTAACTGTTCACGG
ACTAGCTGTACCTACCGTTTCTTTTTTAGGGTCAATATCAGCAATGCAATTCATCCAACGATAAACCTAATCCGAATTATAGAGCTATGACACAATCAAATCCGAACGAA
CAAAATGTTGAATTGAATCGTACCAGTCTTTACTGGGGGTTATTACTCATTTTTGTACTTGCTGTTTTATTTTCCAATTATTTCTTCAATTAAATAAAAGAAAATACTAA
ATAATAGTACGAATTATCTTATCCCATTCGGAAGGATATCATCTCATAATTATCTATGACTGTTTCTGTCTCTAGCACGACCACTTGATGAAATGGGGAGGGAAGTGGGA
CAAATGGCCGAGACTACTGGAAGGATTCCTCTTTGGATAATCGGTACTGTAACTGGTATTCCTGTGATCGGTTTAGTTGGTATTTTCTTTTATGGTTCATATT
Protein sequenceShow/hide protein sequence
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF