CuGenDBv2

Gene ID	IVF0011477
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Mitochondrial protein YMF19
Genome location	chr07:1212250..1212721
RNA-Seq Expression	IVF0011477
Synteny	IVF0011477
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0031966 - mitochondrial membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR003319 - ATP synthase YMF19-like, N-terminal IPR009455 - ATP synthase YMF19, uncharacterised, C-terminal IPR044975 - ATP synthase protein YMF19

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AEN56101.1 ATPase subunit 8 [Cucumis melo subsp. melo]

9.11e-83

80.5

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DKLTYFTQFFWS LFF TFYIPICNDGD VLGISRILKL NQLVS  GKNIRSKDPNSLED+LRKGFSTG+SYMYSSFKEVSQWC+ VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSLL-------------SIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT L              +IFYLISKSSYSTSSNPGWGI C NEIMLIHVLH QGS+VF
Subjt:  ITSLL-------------SIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

KAF3948147.1 hypothetical protein CMV_025819 [Castanea mollissima]

1.61e-76

74.84

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DK TYFTQFFWS LFF TFYIPICNDGD +LGISRILKL NQLVS  G NIRS DPNSLED+LRKGFSTG+SYMYSS  EVSQWC  VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSLL-------------SIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT +              +IFYLISKSSYSTSSNPGWGI C N+IMLIHV H QGS+VF
Subjt:  ITSLL-------------SIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

QWQ55693.1 ATPase subunit 8 [Erythropalum scandens]

2.29e-76

75.47

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DK TYFTQFFWS LF  TFYIPICNDGD VLGISRILKL NQLVS  G NIRS DPNSLED+LRKGFSTG+SYMYSS  EVSQWC  VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSLL-------------SIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT +              +IFYLISKSSYSTSSNPGWGITC N+IMLIHV H QGS+VF
Subjt:  ITSLL-------------SIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

YP_004849349.1 ATPase subunit 8 [Cucumis sativus]

3.18e-83

81.13

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DKLTYFTQFFWS LFF TFYIPICNDGD VLGISRILKL NQL+S  GKNIRSKDPNSLEDLLRKGFSTG+SYMYSSFKEVSQWCK VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSLL-------------SIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT L              +IFYLISKSSYSTSSNPGWGI C NEIMLIHVLH QGS+VF
Subjt:  ITSLL-------------SIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

YP_009913617.1 ATPase subunit 8 [Luffa acutangula]

3.40e-78

76.73

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DKLTYFTQFFWS LFF TFYIPICNDGD VLGISRILKL NQLVS  G NIRS DPNSLED+LRKGFSTG+SYMYSS  EVSQWC  VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSLL-------------SIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT +              +IFYLISKSSYSTSSNPGWGI C N+IMLIHVLH QGS+VF
Subjt:  ITSLL-------------SIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

TrEMBL top hits

e value

%identity

Alignment

A0A3S9JII4 Mitochondrial protein YMF19

7.9e-63

80.5

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DKLTYFTQFFWS LFF TFYIPICNDGD VLGISRILKL NQLVS  GKNIRSKDPNSLED+LRKGFSTG+SYMYSSFKEVSQWC+ VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT L              +IFYLISKSSYSTSSNPGWGI C NEIMLIHVLH QGS+VF
Subjt:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

A0A6H0AKT1 Mitochondrial protein YMF19

4.5e-58

74.84

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DK TYFTQFFWS LFF TFYIPICNDGD +LGISRILKL NQLVS  G NIRS DPNSLED+LRKGFSTG+SYMYSS  EVSQWC  VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT +              +IFYLISKSSYSTSSNPGWGI C N+IMLIHV H QGS+VF
Subjt:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

A0A7D6C3L7 Mitochondrial protein YMF19

2.4e-59

76.73

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DKLTYFTQFFWS LFF TFYIPICNDGD VLGISRILKL NQLVS  G NIRS DPNSLED+LRKGFSTG+SYMYSS  EVSQWC  VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT +              +IFYLISKSSYSTSSNPGWGI C N+IMLIHVLH QGS+VF
Subjt:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

G3EJ01 Mitochondrial protein YMF19

3.6e-63

81.13

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DKLTYFTQFFWS LFF TFYIPICNDGD VLGISRILKL NQL+S  GKNIRSKDPNSLEDLLRKGFSTG+SYMYSSFKEVSQWCK VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT L              +IFYLISKSSYSTSSNPGWGI C NEIMLIHVLH QGS+VF
Subjt:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

G3EU18 Mitochondrial protein YMF19

7.9e-63

80.5

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DKLTYFTQFFWS LFF TFYIPICNDGD VLGISRILKL NQLVS  GKNIRSKDPNSLED+LRKGFSTG+SYMYSSFKEVSQWC+ VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT L              +IFYLISKSSYSTSSNPGWGI C NEIMLIHVLH QGS+VF
Subjt:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

SwissProt top hits

e value

%identity

Alignment

P08746 Putative ATP synthase protein YMF19

1.1e-58

73.58

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DK TYFTQFFWS LF  TFYIPICNDGD VLGISRILKL NQL+S  GKNI  KDPNSLE+LLRKGFSTG+SYMYSS  EVSQWCK VDLLGKR+K
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT +              +IFYLISKSSYSTSSN GWG+TC N+IMLIHV H QGS+VF
Subjt:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

P41248 Putative ATP synthase protein YMF19

1.3e-57

72.96

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVSGK--NIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DK TYFTQFFWS LF  TFYI ICNDGD +LGISRILKL NQL+S +  NIRSKDPNSLED+LRKGFSTG+SYMYSS  E SQWCK VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVSGK--NIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF
        IT +              +IFYLISKSSYSTSSNPGWGITC N+IMLIHV H QGS+ F
Subjt:  ITSL-------------LSIFYLISKSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

P93303 ATP synthase protein YMF19

3.1e-48

68.99

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DK TYF+QFFW  LFF TFYI ICNDGD VLGISRILKL NQL+S  GK IRSKDPNSLEDLLRKGFSTG+SYMY+S  EVSQWCK VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSLLSIFYLISKS-----------SYSTSSNPGWGIT---CSNEIMLIHVLHDQGSV
        IT L+S F  IS S           S S+ SN G  IT   C N+IMLIHV+H QGS+
Subjt:  ITSLLSIFYLISKS-----------SYSTSSNPGWGIT---CSNEIMLIHVLHDQGSV

Q03152 Putative ATP synthase protein YMF19

9.1e-48

68.35

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DK TYF+QFFW  LFF TFYI ICNDGD VLGISRILKL NQL+S  GK I+SKDPNSLEDLLRKGFSTG+SYMY+S  EVSQWCK VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSLLSIFYLISKS-----------SYSTSSNPGWGIT---CSNEIMLIHVLHDQGSV
        IT L+S F  IS S           S S+ SN G  IT   C N+IMLIHV+H QGS+
Subjt:  ITSLLSIFYLISKS-----------SYSTSSNPGWGIT---CSNEIMLIHVLHDQGSV

Q06564 Putative ATP synthase protein YMF19

2.6e-47

67.72

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DK TYF+QFFW  LFF TFYI ICNDGD VLGISRILKL NQL+S  GK I+SKDPNSLEDLLRKGFSTG+SYMY+S  EVSQWCK VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSLLSIFYLISKS-----------SYSTSSNPGWGIT---CSNEIMLIHVLHDQGSV
        IT L+S F  IS S           S S+ SN G  IT   C N+IMLIH +H QGS+
Subjt:  ITSLLSIFYLISKS-----------SYSTSSNPGWGIT---CSNEIMLIHVLHDQGSV

Arabidopsis top hits

e value

%identity

Alignment

AT2G07707.1 Plant mitochondrial ATPase, F0 complex, subunit 8 protein

2.2e-49

68.99

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DK TYF+QFFW  LFF TFYI ICNDGD VLGISRILKL NQL+S  GK IRSKDPNSLEDLLRKGFSTG+SYMY+S  EVSQWCK VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSLLSIFYLISKS-----------SYSTSSNPGWGIT---CSNEIMLIHVLHDQGSV
        IT L+S F  IS S           S S+ SN G  IT   C N+IMLIHV+H QGS+
Subjt:  ITSLLSIFYLISKS-----------SYSTSSNPGWGIT---CSNEIMLIHVLHDQGSV

ATMG00480.1 Plant mitochondrial ATPase, F0 complex, subunit 8 protein

2.2e-49

68.99

Show/hide

Query:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK
        MPQ DK TYF+QFFW  LFF TFYI ICNDGD VLGISRILKL NQL+S  GK IRSKDPNSLEDLLRKGFSTG+SYMY+S  EVSQWCK VDLLGKRRK
Subjt:  MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVS--GKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRK

Query:  ITSLLSIFYLISKS-----------SYSTSSNPGWGIT---CSNEIMLIHVLHDQGSV
        IT L+S F  IS S           S S+ SN G  IT   C N+IMLIHV+H QGS+
Subjt:  ITSLLSIFYLISKS-----------SYSTSSNPGWGIT---CSNEIMLIHVLHDQGSV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCTCAATCGGATAAATTGACTTACTTCACACAATTCTTCTGGTCATACCTTTTCTTCTCGACTTTCTATATTCCCATATGCAATGATGGAGATGAAGTACTTGGGAT
CAGTAGAATTCTCAAACTACCAAACCAATTGGTTTCAGGGAAGAACATACGGAGCAAGGACCCCAACAGTTTGGAAGATCTTTTGAGAAAAGGTTTTAGCACTGGTATAT
CCTATATGTACTCTAGTTTCAAAGAAGTATCCCAATGGTGTAAGGTCGTCGACTTATTGGGAAAAAGGAGGAAAATCACTTCTCTCTTAAGTATATTCTATTTGATCTCG
AAGTCCTCGTATAGCACTTCTTCCAATCCTGGATGGGGGATCACTTGTAGCAATGAAATAATGCTAATCCATGTTCTACACGACCAAGGAAGCGTTGTTTTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPQSDKLTYFTQFFWSYLFFSTFYIPICNDGDEVLGISRILKLPNQLVSGKNIRSKDPNSLEDLLRKGFSTGISYMYSSFKEVSQWCKVVDLLGKRRKITSLLSIFYLIS
KSSYSTSSNPGWGITCSNEIMLIHVLHDQGSVVF

IVF0011477 (gene) of Melon (IVF77) v1 genome