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IVF0011506 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011506
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr01:16039470..16039796
RNA-Seq ExpressionIVF0011506
SyntenyIVF0011506
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032918.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.01e-0772.34Show/hide
Query:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS
        MEPPP RQRPPN+RQPP N QN+S  + PQSVASSS TT SRK+ PS
Subjt:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS

KAA0040832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.14e-0878.26Show/hide
Query:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIP
        MEPPPGRQRP NQRQP QN QN +PQR PQSVA+SS TT SRKK P
Subjt:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIP

KAA0050447.1 polyprotein [Cucumis melo var. makuwa]6.36e-0779.55Show/hide
Query:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKK
        MEPPPGRQR PNQRQ PQ+ QN+SPQR PQ+VASSSETT SR K
Subjt:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKK

TYK17808.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.14e-0878.26Show/hide
Query:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIP
        MEPPPGRQRP NQRQP QN QN +PQR PQSVA+SS TT SRKK P
Subjt:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIP

TYK28082.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.01e-0772.34Show/hide
Query:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS
        MEPPP RQRPPN+RQPP N QN+S  + PQSVASSS TT SRK+ PS
Subjt:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS

TrEMBL top hitse value%identityAlignment
A0A5A7SQU5 Retrotransposable element Tf27.7e-0672.34Show/hide
Query:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS
        MEPPP RQRPPN+RQPP N QN+S  + PQSVASSS TT SRK+ PS
Subjt:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS

A0A5A7TBK1 Retrotransposable element Tf21.2e-0676.6Show/hide
Query:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS
        MEPPPGRQRP NQRQP QN QN +PQR PQSVA+SS TT SRKK P+
Subjt:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS

A0A5A7U7T9 Polyprotein5.0e-0579.55Show/hide
Query:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKK
        MEPPPGRQR PNQRQ PQ+ QN+SPQR PQ+VASSSETT SR K
Subjt:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKK

A0A5D3D2Q6 Retrotransposable element Tf21.2e-0676.6Show/hide
Query:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS
        MEPPPGRQRP NQRQP QN QN +PQR PQSVA+SS TT SRKK P+
Subjt:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS

A0A5D3DX32 Retrotransposable element Tf27.7e-0672.34Show/hide
Query:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS
        MEPPP RQRPPN+RQPP N QN+S  + PQSVASSS TT SRK+ PS
Subjt:  MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCGCCTCCGGGCCGGCAACGGCCACCGAACCAGCGGCAGCCACCGCAAAACGGTCAAAACGATAGTCCACAGAGACTACCTCAATCAGTAGCTTCCTCCTCAGA
AACTACTCTTTCTAGGAAAAAAATCCCCAGCTCAATCATCTGCACCAACACCTATGATATCCAGGCGACGTCAAGGTTCTGCTCAAAGAACATTAACTATTCAATCAGAC
TCTTCGAGTCTTCCCCCTATTCCTTCAACCGCATTGTTGCGTCCCTCTGGACCAACAACTCCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCGCCTCCGGGCCGGCAACGGCCACCGAACCAGCGGCAGCCACCGCAAAACGGTCAAAACGATAGTCCACAGAGACTACCTCAATCAGTAGCTTCCTCCTCAGA
AACTACTCTTTCTAGGAAAAAAATCCCCAGCTCAATCATCTGCACCAACACCTATGATATCCAGGCGACGTCAAGGTTCTGCTCAAAGAACATTAACTATTCAATCAGAC
TCTTCGAGTCTTCCCCCTATTCCTTCAACCGCATTGTTGCGTCCCTCTGGACCAACAACTCCAAATAA
Protein sequenceShow/hide protein sequence
MEPPPGRQRPPNQRQPPQNGQNDSPQRLPQSVASSSETTLSRKKIPSSIICTNTYDIQATSRFCSKNINYSIRLFESSPYSFNRIVASLWTNNSK