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IVF0011513 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011513
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTwinkle-like protein, chloroplastic/mitochondrial
Genome locationchr11:19322822..19328301
RNA-Seq ExpressionIVF0011513
SyntenyIVF0011513
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0043139 - 5'-3' DNA helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3942664.1 hypothetical protein CMV_030703, partial [Castanea mollissima]2.06e-1785.11Show/hide
Query:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        L RCE+DSLPSI WVLDLAKAAVLRHGVR LVIDPY+ELDHQR  NQ
Subjt:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
PQQ11927.1 hypothetical protein Pyn_26917 [Prunus yedoensis var. nudiflora]4.55e-1885.11Show/hide
Query:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        L RCE+DSLPSISWVL+LA+AAVLRHGVR LVIDPY+ELDHQR PNQ
Subjt:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
RVW51091.1 Twinkle-like protein, chloroplastic/mitochondrial [Vitis vinifera]2.55e-1785.11Show/hide
Query:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        L RCENDSLP+I WVLDLAKAAVLRHGVR LVIDPY+ELDHQR  NQ
Subjt:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
RVX16033.1 Twinkle-like protein, chloroplastic/mitochondrial [Vitis vinifera]2.68e-1886.67Show/hide
Query:  RCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        RCENDSLP+I WVLDLAKAAVLRHGVR LVIDPY+ELDHQR  NQ
Subjt:  RCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
TQE12019.1 hypothetical protein C1H46_002413 [Malus baccata]1.18e-1785.11Show/hide
Query:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        L RCE+DSLP+ISWVLDLA+AAVLRHGVR LVIDPY+ELDHQR PNQ
Subjt:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
TrEMBL top hitse value%identityAlignment
A0A445GTB3 Twinkle-like protein, chloroplastic/mitochondrial9.5e-1487.23Show/hide
Query:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        L RCE+DSLP+ISWVLDLAKAAVLRHGVR LVIDPY+ELDHQR PNQ
Subjt:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
A0A498IYU5 Uncharacterized protein2.8e-1385.11Show/hide
Query:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        L RCE+DSLP+ISWVLDLA+AAVLRHGVR LVIDPY+ELDHQR PNQ
Subjt:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
A0A7J6FQE3 Uncharacterized protein2.8e-1385.11Show/hide
Query:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        L RCE+DSLP+I WVLDLAKAAVLRHGVR LVIDPY+ELDHQR PNQ
Subjt:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
A0A803QHB7 Uncharacterized protein2.8e-1385.11Show/hide
Query:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        L RCE+DSLP+I WVLDLAKAAVLRHGVR LVIDPY+ELDHQR PNQ
Subjt:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
K7MB62 Uncharacterized protein9.5e-1487.23Show/hide
Query:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        L RCE+DSLP+ISWVLDLAKAAVLRHGVR LVIDPY+ELDHQR PNQ
Subjt:  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
SwissProt top hitse value%identityAlignment
B5X582 Twinkle homolog protein, chloroplastic/mitochondrial3.5e-1377.78Show/hide
Query:  RCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        RCE DSLPSI WVL+ AKAAVLR+G+R LVIDPY+ELDHQR P Q
Subjt:  RCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
Arabidopsis top hitse value%identityAlignment
AT1G30680.1 toprim domain-containing protein2.5e-1477.78Show/hide
Query:  RCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ
        RCE DSLPSI WVL+ AKAAVLR+G+R LVIDPY+ELDHQR P Q
Subjt:  RCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGTGATTATTCTGACTAGGTGTGAAAATGATTCCCTCCCAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTCGATTGGTAAT
TGACCCTTATAGTGAGCTTGACCATCAACGGCTTCCAAATCAGTTTTGTTGA
mRNA sequenceShow/hide mRNA sequence
CTTTTTTTCAATATTACCAATTTAGCCCACCTTTCATTTTCCCCTTACCCAAGTTGACACTCCCATCTTTCGTCTTCTTACTCTTCTCCGGTTTTCCATTTTCCATCTTT
CGTCCATACATACGCAACACCATGTCTAAATCTTTCTCTCTCACCATTCTTCTCCTCTACCATTCCATTTGAGCAATTCCGCTGTCTGAGATCATTCGTTTTTGGAGTAA
CTCTAAATTTTGTGAGTCCTCTGTGGCTTGTGGTGGCAGCCACCCTTTCTTCGCCTTCCCCTTCTCTCGGTAGCTTTTTCTACGAGGAAGAGGAATCGAAAGATTCAAGC
AATGTATTATCTTAATCTTTACCATTTTAATCTGTCTTCTTTTTTGCTGAAGGAGCTTCCGCTTTCGGTTTCTTAACCACTTGTCTTGTCTTTGCATGGGCATCAACGGA
TTAGAGTTTATGATTCCACCATTCTTTGCGGGTACAGGGTAAAAAGAGCAATTATTAATATATAGTAGAGGATCTTAATTAATCCCAATCTTAATTATTTTCTCAAATTA
TATATATCTATGTGCAAGTAATAATGAAATACACATTATAGTGAATATTGATTATTGATTGTAACGAACTAAACAGAGTAAGAGTAGCAAATGAGCTGGGAGGCGGCAAT
GGAAAAGGAGCCAAGTTTGCAGCCATTGTGTCATCAACAACATCATTAGTAATTGGCATTCTCTTTTGTTGTTTAATTGTAATATCTAACGACAAATTTGGTCTTCTTTT
TTCCTCTACCGACATTGTTATTCAAGAAGTCAATAAACTTAGTATCCTCTTGGCCTTCACTATCCTCTTCAACAATGTCCAGCCAGTCCTCTCCGGTATGACAATTTTAC
TATAATGTACTAATTTGTATTTCAAAATTAACTATCTTTTCATAAATATTTAATTTGCTGTGATCTAAATATATAGGAGCGGCGGTTGGAACAGGTTGGCAGTCTTATTT
AACTTGTATAAATTTGGGTTGCTATTATTTCATTGGTTTGCCTCTTGGCATTTTCTGAGACTGAGACTAATTAGTTTTAGCAATTCACCATTTGAGATGCAAAATTTCAC
TCTCATTCCTCACTGTTCTTTTTCATTCCATAGCATATCAATCAATACAATGGATGAAGCAAGTATTCTTTTTATATGCACTGCCAGTATTCTTTTTCATCTCAAAAGAG
TGACTTAGTAAAGAGTTATTTTAAACATTATCGCTTAACTTAACTTCCAAAGTTTTCTTTTCTACTTAAAGTTCTATTAAGATCCTTTCTAGCTCTTTCTCAACGTCTTG
GATTAGTTTATAATCCATGAGAATTCCCTCATTGTAGTTTGAGACTGATTAAAAGTGTTTGAATTGAGTTTTAAGGCTATTTTTGCAGGCACGACCATACTCGACCAAGA
TTTGTTCTATAAGTTTAGGGTACTAAGGCTAATGCTATTTTGAAGGATTCTGAAAGTGAGAACAAAAAGAATGCTCGTGATTATTCTGACTAGGTGTGAAAATGATTCCC
TCCCAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTCGATTGGTAATTGACCCTTATAGTGAGCTTGACCATCAACGGCTTCCAAAT
CAGTTTTGTTGATGGTTTGGAGATGGGAAATAACACAAAGGTACAAAATTAGTTCTAAATAAATTTAAAAGGTAACTTACATAGTTACAACAAGGTTGGTTAGGAACCCA
AAAGCTTTGATGTTGGATGAGATTATCAACTATGTGCAGTCATTACAACACCAAGTTGAGGTAATTATATTTTAGAATAAAATTAGGAAAAAAAATGTGGTCCACATTGC
CGTTTCAAATTATATTTTTGCCTTTAAGACATGGCTAGAAAAGTAGATCGCCAACCTGACATAAAACTTAGACGTGAGAAGTAGATAACAAAGTAAGAAATTCATTGCTG
GAAAATGGTGTTTATAGGCTTAATTTTCAAAATCTAAAAATACACAAATCATTAAAGGAGCTTTGGTTTTACTATTTTTTTCCTTGGAACAAAAATGCACTACCTATATG
CAGCTATGCGAATATTGGCGTGTTTAAAATGTAGTGGCTTGCACAGAAGCCTTGGAACACATATATCAAAGGTAATGCTCACCTTTCCGAAGATGAAGATTATGGTTTGC
ATTTCTTTAAATGTGTCACCGGAATAAAAGTTATTTTATGTAATTTTCTAGTTATGCTAAAGCTAAGGTTGGTCAATGATGTTGTTTGAATATTCCTAAAGAAAGAGAAC
GCTAGAAGGTTTTACTTCCTTTCTCGTATTAGAAAACTATGCTTGAACTTAGAGTAACCTTTTTGGTTATGTGCTGTGAGGGCTAAATAAAAGTTGTAGTTCTAAGGACA
TTGTTGGTTTTGGTTTAGGTTTTGTCAATAACATTGGATGAATGGTCTGACGATGAGATTGATGCAATGAATGATAGATTTTTTCCATAATTATCTTAAGCTTTATATTT
TTAATATAGCTTCGTTTTTACTCTGGTCATATATTCTAGTTTGGTATTCGATTGAATTGAAGAATTGGTATTGATTTTTTGTTCTTTAGATAGTTTAGTTTTGATCTAAT
ATTGAGTGGTTAAATTCAAATAGAAAGTGTATAATTCAAAAATACTATACGTGTTGCATAGAACACTAGCATACAGCAAATTCACTATTATTTTTAATAGAGTGTTATTG
ACTTATCAACGTACTGACAATTAATGTGAAACCTTTGAGTTTCTTGTTGTTTAGGATACTAGTCGAGTCATCCATGGATTGGATTGTCGGTTGCTTGTTCTGAATCCTGG
CCTGACGTTATGATTTTGTTTTTGTTTATCATTTATATGCGGCTTGATGGTGAAAACTAATAGAATCCTTGACTCACGGATGTAGTTGAAATCTCTCCTATAGACATGTT
TGCTTGATTGTTGTTGAAATCTCCTATGAACAAGAGTCCCCAAGGGGATTCATTACTCAACACCCTATGAACAATATATTATTTATAGATAAAACACCCATAACAACAAA
ATTATTCACAATCTTAATCGAACTTATGAAATTCTATCTAACATAATAAATGTATAAAACTGTGATTCTCAGAAAGGAGGTGGAGATTCCAGACAATTACCCAAAATTTC
CAACTTAGAGGAGAGTTTGGGTGGAAGATTTACTGAGATAACGGGCGAAAGGTTGAAGAAAATGTTGGAGGAGATGGAAGAAGAGGAATTCTGCATCATTACAAAATGTA
TAATATTAAATTAATAAAAATTGTCAACTCACCGTTTAATATCCACGTCATTTTACTGTTAGTTAAGTAACCTTAAGGATCATTCGTTTTCAAGGACTCAAGTGTTCATT
TTGAAATCTAG
Protein sequenceShow/hide protein sequence
MLVIILTRCENDSLPSISWVLDLAKAAVLRHGVRLVIDPYSELDHQRLPNQFC