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IVF0011527 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011527
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr08:21747665..21747916
RNA-Seq ExpressionIVF0011527
SyntenyIVF0011527
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031897.1 gag/pol protein [Cucumis melo var. makuwa]7.23e-3271.6Show/hide
Query:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDT
        M GLS KNKVG S+MKK GK + L NS  KKVVKG CYHYN N HWL N+PKY+ EKKT+KE QGKY+LLAVET LE+HDT
Subjt:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDT

KAA0035756.1 gag/pol protein [Cucumis melo var. makuwa]4.15e-2766.25Show/hide
Query:  GLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTS
        G S K +VG SQ+KK GKG+T  NS  KKV KG CYH N+  HWLRN PKY+AEKK +KE QGKY+LLA+ETCL E+DTS
Subjt:  GLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTS

KAA0056018.1 gag/pol protein [Cucumis melo var. makuwa]1.03e-2765.06Show/hide
Query:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST
        +RG S K +VG SQMKK   G+TL N+  KKV KG CYHYN++ HWLRN  KY+ EKK +KE QGKY+LLAVETCL E+DTST
Subjt:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST

TYK08877.1 gag/pol protein [Cucumis melo var. makuwa]1.32e-3272.29Show/hide
Query:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST
        M GLS KNKVG S+MKK GK + L NS  KKVVKG CYHYN N HWLRN+ KY+ EKKT+KE QGKY+LLAVET LE+HDTST
Subjt:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST

TYK27705.1 gag/pol protein [Cucumis melo var. makuwa]1.57e-2765.06Show/hide
Query:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST
        +RG S K +VG SQMKK   G+TL N+  KKV KG CYHYN++ HWLRN  KY+ EKK +KE QGKY+LLAVETCL E+DTST
Subjt:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST

TrEMBL top hitse value%identityAlignment
A0A5A7SR82 Gag/pol protein1.6e-2371.6Show/hide
Query:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDT
        M GLS KNKVG S+MKK GK + L NS  KKVVKG CYHYN N HWL N+PKY+ EKKT+KE QGKY+LLAVET LE+HDT
Subjt:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDT

A0A5A7T0L9 Gag/pol protein9.6e-2166.25Show/hide
Query:  GLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTS
        G S K +VG SQ+KK GKG+T  NS  KKV KG CYH N+  HWLRN PKY+AEKK +KE QGKY+LLA+ETCL E+DTS
Subjt:  GLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTS

A0A5A7ULR1 Gag/pol protein3.3e-2165.06Show/hide
Query:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST
        +RG S K +VG SQMKK   G+TL N+  KKV KG CYHYN++ HWLRN  KY+ EKK +KE QGKY+LLAVETCL E+DTST
Subjt:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST

A0A5D3CA46 Gag/pol protein4.2e-2472.29Show/hide
Query:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST
        M GLS KNKVG S+MKK GK + L NS  KKVVKG CYHYN N HWLRN+ KY+ EKKT+KE QGKY+LLAVET LE+HDTST
Subjt:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST

A0A5D3DWL6 Gag/pol protein3.3e-2165.06Show/hide
Query:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST
        +RG S K +VG SQMKK   G+TL N+  KKV KG CYHYN++ HWLRN  KY+ EKK +KE QGKY+LLAVETCL E+DTST
Subjt:  MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGATTGTCCTTTAAAAATAAAGTTGGAACTTCACAAATGAAGAAAAACGGAAAGGGGAGAACACTGAACAACAGTGATAGAAAGAAAGTTGTGAAAGGTATATG
TTACCACTACAACCAGAACGTCCATTGGTTGAGAAATTACCCAAAGTATATTGCTGAGAAGAAAACTAAGAAGGAAACACAAGGTAAATATAATTTACTAGCTGTTGAAA
CATGCTTAGAAGAACATGATACTTCAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGATTGTCCTTTAAAAATAAAGTTGGAACTTCACAAATGAAGAAAAACGGAAAGGGGAGAACACTGAACAACAGTGATAGAAAGAAAGTTGTGAAAGGTATATG
TTACCACTACAACCAGAACGTCCATTGGTTGAGAAATTACCCAAAGTATATTGCTGAGAAGAAAACTAAGAAGGAAACACAAGGTAAATATAATTTACTAGCTGTTGAAA
CATGCTTAGAAGAACATGATACTTCAACCTAA
Protein sequenceShow/hide protein sequence
MRGLSFKNKVGTSQMKKNGKGRTLNNSDRKKVVKGICYHYNQNVHWLRNYPKYIAEKKTKKETQGKYNLLAVETCLEEHDTST