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IVF0011530 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011530
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr02:8681139..8681345
RNA-Seq ExpressionIVF0011530
SyntenyIVF0011530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34082.1 hypothetical protein [Cucumis melo subsp. melo]5.04e-1674.55Show/hide
Query:  GDDGGR-KRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG
        GDDGGR KR RSIGWWREK ATMV+G        GGRERLR DGFE WVADGNDG
Subjt:  GDDGGR-KRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG

KAA0058345.1 hypothetical protein E6C27_scaffold409G00310 [Cucumis melo var. makuwa]3.35e-1668.42Show/hide
Query:  MRAGDDGGRKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG
        +RA D GGRKRQRSIGWWREK  TMV+G        GGR+RLRS+GFE WVADGN+G
Subjt:  MRAGDDGGRKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG

KAA0063959.1 gag/pol protein [Cucumis melo var. makuwa]1.24e-1472.73Show/hide
Query:  GDDGGRKRQ-RSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG
        GDDGGR++  +SIGWWREK+ATMV+G        GGRERLRSDGFERWVADGNDG
Subjt:  GDDGGRKRQ-RSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG

KAA0065564.1 hypothetical protein E6C27_scaffold90G00010 [Cucumis melo var. makuwa]4.01e-1269.81Show/hide
Query:  DDGGR-KRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGND
        DDGGR KR RSIGWWREK   MV+G        GGRERLRSD FE WVADGND
Subjt:  DDGGR-KRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGND

TYJ97581.1 hypothetical protein E5676_scaffold17962G00010 [Cucumis melo var. makuwa]4.82e-1166Show/hide
Query:  GDDGGRKRQ-RSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVA
        GDDGGR++  +SIGWWREK+ATMV+G        GGRERLRSDGFERW  
Subjt:  GDDGGRKRQ-RSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVA

TrEMBL top hitse value%identityAlignment
A0A5A7UXJ5 Uncharacterized protein3.6e-1168.42Show/hide
Query:  MRAGDDGGRKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG
        +RA D GGRKRQRSIGWWREK  TMV+G        GGR+RLRS+GFE WVADGN+G
Subjt:  MRAGDDGGRKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG

A0A5A7VE58 Uncharacterized protein1.7e-0869.81Show/hide
Query:  DDGG-RKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGND
        DDGG RKR RSIGWWREK   MV+G        GGRERLRSD FE WVADGND
Subjt:  DDGG-RKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGND

A0A5D3C1D1 Gag/pol protein9.6e-1272.73Show/hide
Query:  GDDGGRKR-QRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG
        GDDGGR++  +SIGWWREK+ATMV+G        GGRERLRSDGFERWVADGNDG
Subjt:  GDDGGRKR-QRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG

A0A5D3DFW9 Uncharacterized protein6.2e-1174.55Show/hide
Query:  GDDGG-RKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG
        GDDGG RKR RSIGWWREK ATMV+G        GGRERLR DGFE WVADGNDG
Subjt:  GDDGG-RKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG

E5GC83 Uncharacterized protein6.2e-1174.55Show/hide
Query:  GDDGG-RKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG
        GDDGG RKR RSIGWWREK ATMV+G        GGRERLR DGFE WVADGNDG
Subjt:  GDDGG-RKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGCGGGGGATGATGGAGGGAGAAAACGGCAACGATCGATCGGGTGGTGGAGGGAGAAATCGGCGACGATGGTGGAAGGGAGAAAACGGCAACGATGGTGGATGGG
AGGGAGAGAACGGCTGAGGTCGGACGGCTTTGAGAGGTGGGTGGCGGACGGAAACGACGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGCGGGGGATGATGGAGGGAGAAAACGGCAACGATCGATCGGGTGGTGGAGGGAGAAATCGGCGACGATGGTGGAAGGGAGAAAACGGCAACGATGGTGGATGGG
AGGGAGAGAACGGCTGAGGTCGGACGGCTTTGAGAGGTGGGTGGCGGACGGAAACGACGGCTAA
Protein sequenceShow/hide protein sequence
MRAGDDGGRKRQRSIGWWREKSATMVEGRKRQRWWMGGRERLRSDGFERWVADGNDG