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IVF0011576 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011576
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionBED-type domain-containing protein
Genome locationchr04:11490..13065
RNA-Seq ExpressionIVF0011576
SyntenyIVF0011576
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR003656 - Zinc finger, BED-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047882.1 hypothetical protein E6C27_scaffold133G001550 [Cucumis melo var. makuwa]3.50e-11398.84Show/hide
Query:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
        MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
Subjt:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG

Query:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
        SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VV+NRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
Subjt:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA

KAA0053508.1 uncharacterized protein E6C27_scaffold190G00650 [Cucumis melo var. makuwa]2.23e-11296.51Show/hide
Query:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
        MADESSKKD AWKYGRLQNDQDINTFV GFCSKVTKGGVYRLKQHLVGGYRNAIACKKC DHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
Subjt:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG

Query:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
        SISVNNRATSSGSSLKKPRQKGPMDAFFT NPE+VV+NRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
Subjt:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA

TYK03327.1 hypothetical protein E5676_scaffold6571G00020 [Cucumis melo var. makuwa]7.43e-11398.26Show/hide
Query:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
        MADESSKKDPAWKYGRLQN+QDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
Subjt:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG

Query:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
        SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VV+NRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
Subjt:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA

TYK16403.1 uncharacterized protein E5676_scaffold21G001980 [Cucumis melo var. makuwa]1.32e-11394.77Show/hide
Query:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
        MADESSKKD AWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNA AC+KCPDHVKEEI+DYMSKKKEIKEQRNLIVDIDVQDYG+EDEDEG
Subjt:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG

Query:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
        SISVNNRATSSGSSLKKPRQKGPMDAFFT NPE VV+NRKNDK KQTSLNAAYKKEMREHTIQRIARWFYDA
Subjt:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA

TYK26052.1 hypothetical protein E5676_scaffold1185G00050 [Cucumis melo var. makuwa]6.45e-11298.26Show/hide
Query:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
        MADESSKKDPAWKYGRLQN+QDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
Subjt:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG

Query:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
        SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VV+NRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
Subjt:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA

TrEMBL top hitse value%identityAlignment
A0A5A7TWK3 BED-type domain-containing protein6.7e-9398.84Show/hide
Query:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
        MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
Subjt:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG

Query:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
        SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VV+NRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
Subjt:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA

A0A5A7TY62 BED-type domain-containing protein2.0e-9298.26Show/hide
Query:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
        MADESSKKDPAWKYGRLQN+QDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
Subjt:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG

Query:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
        SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VV+NRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
Subjt:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA

A0A5A7V8P5 BED-type domain-containing protein2.0e-9298.26Show/hide
Query:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
        MADESSKKDPAWKYGRLQN+QDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
Subjt:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG

Query:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
        SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VV+NRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
Subjt:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA

A0A5D3BV42 BED-type domain-containing protein2.0e-9298.26Show/hide
Query:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
        MADESSKKDPAWKYGRLQN+QDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
Subjt:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG

Query:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
        SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VV+NRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
Subjt:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA

A0A5D3DXN3 BED-type domain-containing protein2.0e-9298.26Show/hide
Query:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
        MADESSKKDPAWKYGRLQN+QDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG
Subjt:  MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEG

Query:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
        SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VV+NRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA
Subjt:  SISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G36095.1 DNA binding1.0e-1336.49Show/hide
Query:  MADESSKK--DPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVD--IDVQDYGMED
        M+DE S K  DP  KY +        ++ C +C KVT GGV   KQH++GG+RN   C   P  ++EEI+D M KK EIK    ++        DYG E+
Subjt:  MADESSKK--DPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVD--IDVQDYGMED

Query:  EDEGSISVNNRATSSGSSLKKP---RQKGPMDAFFTPNPETVVKNRKN
        E          A   G+  ++P   +QKG MD F  P    V+K  K+
Subjt:  EDEGSISVNNRATSSGSSLKKP---RQKGPMDAFFTPNPETVVKNRKN

AT1G79740.1 hAT transposon superfamily1.5e-0435.21Show/hide
Query:  KKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVG-GYRNAIACKKCPDHVKEEIRDYMSKKKE
        +KD  W+Y       D N   C FCS+V  GG+ RLK HL     +    C K  D V + +R  +S K +
Subjt:  KKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVG-GYRNAIACKKCPDHVKEEIRDYMSKKKE

AT3G17450.1 hAT dimerisation domain-containing protein9.5e-0732Show/hide
Query:  DPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKK-KEIKEQRN
        DP W++G  Q DQ      C +C K+  GG+YRLKQHL         C K P+ V   +++ + +  K++++  +
Subjt:  DPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKK-KEIKEQRN

AT5G31412.1 hAT transposon superfamily protein5.8e-0436.17Show/hide
Query:  WKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKK
        W+Y  + N ++ +   C  C K   GGVYR+K+H+     N +AC K
Subjt:  WKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATGAAAGTTCTAAAAAAGATCCAGCATGGAAATATGGTCGATTGCAAAATGACCAAGATATAAATACGTTTGTTTGTGGATTTTGTTCGAAAGTAACAAAAGG
AGGGGTGTATCGATTGAAACAACACCTCGTTGGTGGTTATAGAAATGCCATAGCTTGTAAAAAATGTCCGGATCATGTAAAGGAAGAAATTAGAGATTACATGTCCAAGA
AAAAGGAGATCAAAGAACAAAGAAATTTGATTGTGGACATTGATGTACAAGATTACGGTATGGAGGATGAAGATGAAGGGAGTATTAGTGTAAATAACAGAGCAACATCA
AGTGGTTCGAGCTTGAAGAAGCCAAGACAAAAGGGTCCAATGGATGCATTTTTTACTCCCAATCCAGAAACTGTGGTTAAAAATAGAAAGAACGACAAAGGAAAACAAAC
TTCGTTGAATGCAGCGTACAAGAAGGAAATGAGGGAGCACACCATCCAAAGAATTGCTCGATGGTTTTATGATGCATGA
mRNA sequenceShow/hide mRNA sequence
CTTAATCTTAAGGCGGAACCTCATCCTAATACATACAAGATAGGTTGGATCAAGAAAGGAGGAGATACACAAATAACTAAAATTTGTTTAGTTCCTTTGTCCATCGAAGA
AAGCTATAAGGATCAAATTGTTTATGATGTTCTTGATATGGATGTCTGCCATGTCCTACTTAAAAGACCATGGCCAGTGTTTTAAAAGGCGCGCTGAGGCGTGCGCCTAG
GCGCAAGGCGCACCACCAGCGCTTCTCAGTGGGTAGGCGAGGCGCCGATGGAAAGGCGCGGCTGAGGCGCGCGCCTTCCTCAAGGCGCCGTAGGCGCGAAAAGCCCACAG
GCGCGGACTTTATAACGTGGGCTGGGCCTTAATTAAAAAAAACAAATATTTACCTATTTTAAACCTATTTAACTTTTACCTAATATATTTACCTAGTACGTGTAACGTGG
CTGTGAAGAAACGAAACGACGGCTCGACTCGACTTGAAGACAACGAAACGATCGACTGCCATCTGTGAAAAACCATCGACTGCGCCACTGCGTACTGCTAATTCTGTAGA
ATTTCTGCGAAAACTGTCACCGGCGGCGGCGCCGGCAAGGGCCACCGGCACCGAGTCGACCACCTTCTTCTTCTTCTTCTTCTTTTTCCATCCAATCTTAATAAAAAAAA
TCCTAAGGTGTGCTGCTCTGTTTTCTTCTTCTTCTTTTTCTTTTTCTTTGGTGCTGACTGCTGCCATTAAAAAAAATCCATTCTTCTTCTTCTTCTTTTTCCTTTGGTTC
TTTTCCTTTGGTGCTGACTGCTGCCATTACTGTTGTGCTGCCAGCCTCCCATTACTCTGTTTTTTGCCATCCAATCTTCTTTTTTGGTGCTTCTTTTGCTGCCATTAGAT
TACTATTAAAAAACATGGCTGATGAAAGTTCTAAAAAAGATCCAGCATGGAAATATGGTCGATTGCAAAATGACCAAGATATAAATACGTTTGTTTGTGGATTTTGTTCG
AAAGTAACAAAAGGAGGGGTGTATCGATTGAAACAACACCTCGTTGGTGGTTATAGAAATGCCATAGCTTGTAAAAAATGTCCGGATCATGTAAAGGAAGAAATTAGAGA
TTACATGTCCAAGAAAAAGGAGATCAAAGAACAAAGAAATTTGATTGTGGACATTGATGTACAAGATTACGGTATGGAGGATGAAGATGAAGGGAGTATTAGTGTAAATA
ACAGAGCAACATCAAGTGGTTCGAGCTTGAAGAAGCCAAGACAAAAGGGTCCAATGGATGCATTTTTTACTCCCAATCCAGAAACTGTGGTTAAAAATAGAAAGAACGAC
AAAGGAAAACAAACTTCGTTGAATGCAGCGTACAAGAAGGAAATGAGGGAGCACACCATCCAAAGAATTGCTCGATGGTTTTATGATGCATGAGTGCCTTTGAATGCTTG
CACATATGATAGTTTTGCCCCTATGATTGAGTCAATTGGGCAATTTGGTCCTGGATTGAAACCACTAACATATCATGAGTTGAGAGTCCCATGTTTGAAGAAGGAATTTG
AAGCAACAAATGAGTTGATGAGGAGCCATAAAGCAG
Protein sequenceShow/hide protein sequence
MADESSKKDPAWKYGRLQNDQDINTFVCGFCSKVTKGGVYRLKQHLVGGYRNAIACKKCPDHVKEEIRDYMSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATS
SGSSLKKPRQKGPMDAFFTPNPETVVKNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDA