CuGenDBv2

Gene ID	IVF0011614
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag-pro-like protein
Genome location	chr05:6943697..6944038
RNA-Seq Expression	IVF0011614
Synteny	IVF0011614
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0037719.1 uncharacterized protein E6C27_scaffold141G00110 [Cucumis melo var. makuwa]

1.21e-65

90.27

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Query:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV
        M TLFQILH  GYLSPRFNNDD EKIGCTNKEQCLFHPETNDHFIEDCCEFKN+VQKLMDAKILL+GQMSMQEI+VNMIT+ASSN+KTSNETTS+WK LV
Subjt:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV

Query:  IHYEEKPSIMSYI
        IHYEEKPSIMSYI
Subjt:  IHYEEKPSIMSYI

KAA0059731.1 uncharacterized protein E6C27_scaffold551G00070 [Cucumis melo var. makuwa]

1.55e-65

94.39

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Query:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV
        MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDH IEDCCEFKN+VQKL+DAKILLIGQMSMQEI+VNMITNASSNEKTSNETTSMWK LV
Subjt:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV

Query:  IHYEEKP
        IHYEE P
Subjt:  IHYEEKP

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]

3.00e-65

92.92

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Query:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV
        MKTLFQILHGAGYLSPRFNNDDREKIGCTN EQCLFHPETNDH IEDCCEFKN+VQKLMD+KILLIGQMSMQEI+VNMITNASSNEKTSNETT MWK  V
Subjt:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV

Query:  IHYEEKPSIMSYI
        IHYEEKPSIMSYI
Subjt:  IHYEEKPSIMSYI

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]

1.16e-65

93.81

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Query:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV
        MKTLFQILHGAGYLSPRFNNDDREKIGCTN EQCLFHPETNDH IEDCCEFKN+VQKLMD+KILLIGQMSMQEI+VNMITNASSNEKTSNETT MWK LV
Subjt:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV

Query:  IHYEEKPSIMSYI
        IHYEEKPSIMSYI
Subjt:  IHYEEKPSIMSYI

TYK09460.1 uncharacterized protein E5676_scaffold499G00530 [Cucumis melo var. makuwa]

1.65e-69

94.69

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Query:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV
        MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDH IEDCCEFKN+VQKL+DAKILLIGQMSMQEI+VNMITNASSNEKTSNETTSMWK LV
Subjt:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV

Query:  IHYEEKPSIMSYI
        IHYEE PSIMSYI
Subjt:  IHYEEKPSIMSYI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SUT0 Reverse transcriptase

3.4e-53

92.04

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Query:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV
        MKTLFQILHGAGYLSPRFNNDDREKIGCTN EQCL HPETNDH IEDCCEFKN+VQKLMD+KILLIGQMSMQ+I+VNMITNASSNEKTSNETT MWK LV
Subjt:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV

Query:  IHYEEKPSIMSYI
        IHYEEKPSIMSYI
Subjt:  IHYEEKPSIMSYI

A0A5A7T8U4 Uncharacterized protein

1.3e-52

90.27

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Query:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV
        M TLFQILH  GYLSPRFNNDD EKIGCTNKEQCLFHPETNDHFIEDCCEFKN+VQKLMDAKILL+GQMSMQEI+VNMIT+ASSN+KTSNETTS+WK LV
Subjt:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV

Query:  IHYEEKPSIMSYI
        IHYEEKPSIMSYI
Subjt:  IHYEEKPSIMSYI

A0A5A7V681 Retrotrans_gag domain-containing protein

6.9e-54

92.92

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Query:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV
        MKTLFQILHGAGYLSPRFNNDDREKIGCTN EQCLFHPETNDH IEDCCEFKN+VQKLMD+KILLIGQMSMQEI+VNMITNASSNEKTSNETT MWK  V
Subjt:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV

Query:  IHYEEKPSIMSYI
        IHYEEKPSIMSYI
Subjt:  IHYEEKPSIMSYI

A0A5A7VAU5 Uncharacterized protein

2.4e-54

93.81

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Query:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV
        MKTLFQILHGAGYLSPRFNNDDREKIGCTN EQCLFHPETNDH IEDCCEFKN+VQKLMD+KILLIGQMSMQEI+VNMITNASSNEKTSNETT MWK LV
Subjt:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV

Query:  IHYEEKPSIMSYI
        IHYEEKPSIMSYI
Subjt:  IHYEEKPSIMSYI

A0A5D3CDQ0 Uncharacterized protein

6.2e-55

94.69

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Query:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV
        MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDH IEDCCEFKN+VQKL+DAKILLIGQMSMQEI+VNMITNASSNEKTSNETTSMWK LV
Subjt:  MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLV

Query:  IHYEEKPSIMSYI
        IHYEE PSIMSYI
Subjt:  IHYEEKPSIMSYI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAAAACGCTTTTCCAAATCCTCCATGGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGATAGAGAGAAGATTGGATGCACCAACAAGGAGCAGTGCTTATTCCA
TCCAGAGACAAATGACCATTTCATTGAGGACTGTTGTGAGTTCAAGAATAAGGTGCAAAAGCTGATGGACGCAAAGATTCTCTTGATAGGACAGATGAGCATGCAGGAAA
TCAAGGTTAATATGATCACTAATGCTTCATCTAATGAGAAAACTTCAAATGAGACGACATCTATGTGGAAACAATTAGTCATTCATTACGAAGAGAAGCCAAGTATTATG
TCTTATATCTAA

mRNA sequence

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Protein sequence

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MKTLFQILHGAGYLSPRFNNDDREKIGCTNKEQCLFHPETNDHFIEDCCEFKNKVQKLMDAKILLIGQMSMQEIKVNMITNASSNEKTSNETTSMWKQLVIHYEEKPSIM
SYI

IVF0011614 (gene) of Melon (IVF77) v1 genome