; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011626 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011626
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:18184582..18185448
RNA-Seq ExpressionIVF0011626
SyntenyIVF0011626
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33917.1 hypothetical protein [Cucumis melo subsp. melo]1.24e-13797.98Show/hide
Query:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
        MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
Subjt:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI

Query:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY
        IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSR KRKRCGRLIE ANIIQNAMEYAN QLNRIVDW ILRNQDASVTQQEVVRQLQAIHELNY
Subjt:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY

KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]6.00e-6445.04Show/hide
Query:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
        MASSSR  KH W KE++A+LVECLV+LVN+ GW SDNGTF  GY +QL RMMA K+ G NI A+TIDS IK M++ FHA++E+RGP+CSGF WNDE   I
Subjt:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI

Query:  IVEKDVFDNWMK------------------------------------------------------------------GLNMSPDEFMDSRLGRSGDGRN
        +VEK++FD+W+K                                                                  GLNMSPD+ M++R  R  + RN
Subjt:  IVEKDVFDNWMK------------------------------------------------------------------GLNMSPDEFMDSRLGRSGDGRN

Query:  ASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHEL
         SS  KRKR G + ++ +I+  A+EY N QL+RI +W IL+ QDAS T+QE+VRQL+AI EL
Subjt:  ASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHEL

KAA0060635.1 retrotransposon protein [Cucumis melo var. makuwa]4.59e-139100Show/hide
Query:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
        MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
Subjt:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI

Query:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY
        IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY
Subjt:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY

TYK02236.1 retrotransposon protein [Cucumis melo var. makuwa]1.35e-141100Show/hide
Query:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
        MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
Subjt:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI

Query:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY
        IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY
Subjt:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]7.43e-6545.04Show/hide
Query:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
        MASSSR  KH W KE++A+LVECLV+LVN+ GW SDNGTF  GY +QL RMMA K+ G NI A+TIDS IK M++ FHA++E+RGP+CSGF WNDE   I
Subjt:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI

Query:  IVEKDVFDNWMK------------------------------------------------------------------GLNMSPDEFMDSRLGRSGDGRN
        +VEK++FD+W+K                                                                  GLNMSPD+ M++R  R  + RN
Subjt:  IVEKDVFDNWMK------------------------------------------------------------------GLNMSPDEFMDSRLGRSGDGRN

Query:  ASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHEL
         SS  KRKR G   ++ +I++ A+EY N QL+RI +W IL+ QDAS T+QE+VRQL+AI EL
Subjt:  ASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHEL

TrEMBL top hitse value%identityAlignment
A0A5A7U098 Retrotransposon protein2.5e-5145.04Show/hide
Query:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
        MASSSR  KH W KE++A+LVECLV+LVN+ GW SDNGTF  GY +QL RMMA K+ G NI A+TIDS IK M++ FHA++E+RGP+CSGF WNDE   I
Subjt:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI

Query:  IVEKDVFDNWMK------------------------------------------------------------------GLNMSPDEFMDSRLGRSGDGRN
        +VEK++FD+W+K                                                                  GLNMSPD+ M++R  R  + RN
Subjt:  IVEKDVFDNWMK------------------------------------------------------------------GLNMSPDEFMDSRLGRSGDGRN

Query:  ASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHEL
         SS  KRKR G + ++ +I+  A+EY N QL+RI +W IL+ QDAS T+QE+VRQL+AI EL
Subjt:  ASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHEL

A0A5A7V442 Retrotransposon protein9.1e-110100Show/hide
Query:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
        MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
Subjt:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI

Query:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY
        IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY
Subjt:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY

A0A5D3BVH6 Retrotransposon protein9.1e-110100Show/hide
Query:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
        MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
Subjt:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI

Query:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY
        IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY
Subjt:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY

A0A5D3C1M0 Retrotransposon protein5.1e-5245.04Show/hide
Query:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
        MASSSR  KH W KE++A+LVECLV+LVN+ GW SDNGTF  GY +QL RMMA K+ G NI A+TIDS IK M++ FHA++E+RGP+CSGF WNDE   I
Subjt:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI

Query:  IVEKDVFDNWMK------------------------------------------------------------------GLNMSPDEFMDSRLGRSGDGRN
        +VEK++FD+W+K                                                                  GLNMSPD+ M++R  R  + RN
Subjt:  IVEKDVFDNWMK------------------------------------------------------------------GLNMSPDEFMDSRLGRSGDGRN

Query:  ASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHEL
         SS  KRKR G   ++ +I++ A+EY N QL+RI +W IL+ QDAS T+QE+VRQL+AI EL
Subjt:  ASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHEL

E5GBS5 Uncharacterized protein9.4e-10797.98Show/hide
Query:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
        MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI
Subjt:  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYI

Query:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY
        IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSR KRKRCGRLIE ANIIQNAMEYAN QLNRIVDW ILRNQDASVTQQEVVRQLQAIHELNY
Subjt:  IVEKDVFDNWMKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCTTCAAGGGACCTCAAACACTTATGGATAAAAGAGAAGGATGCAACCCTCGTAGAATGCCTGGTGAAGTTGGTCAACAGTAGTGGTTGGTGGTCAGACAA
CGGAACCTTTGGACTCGGGTACTATAGTCAACTTACAAGAATGATGGCTCAGAAGATGTCAGGTCCTAACATCCAGGCCACAACTATTGATAGTTGTATAAAAACGATGG
AGAAGACGTTCCATGCTATATCTGAGATTCGGGGCCCATCCTGCAGTGGTTTCAGCTGGAACGATGAATTAAATTACATCATTGTCGAAAAGGACGTATTCGACAATTGG
ATGAAAGGACTAAACATGTCGCCTGATGAATTTATGGACAGTCGACTCGGGCGATCAGGTGACGGTAGGAATGCTTCAAGCAGGTTAAAGAGGAAGAGGTGCGGCCGACT
TATAGAGACTGCGAACATAATTCAAAATGCCATGGAGTACGCCAATGGCCAACTCAACCGCATTGTAGACTGGCTGATTTTAAGGAATCAAGATGCAAGCGTGACACAGC
AGGAGGTTGTTCGACAATTACAGGCCATCCACGAACTTAATTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCTTCAAGGGACCTCAAACACTTATGGATAAAAGAGAAGGATGCAACCCTCGTAGAATGCCTGGTGAAGTTGGTCAACAGTAGTGGTTGGTGGTCAGACAA
CGGAACCTTTGGACTCGGGTACTATAGTCAACTTACAAGAATGATGGCTCAGAAGATGTCAGGTCCTAACATCCAGGCCACAACTATTGATAGTTGTATAAAAACGATGG
AGAAGACGTTCCATGCTATATCTGAGATTCGGGGCCCATCCTGCAGTGGTTTCAGCTGGAACGATGAATTAAATTACATCATTGTCGAAAAGGACGTATTCGACAATTGG
ATGAAAGGACTAAACATGTCGCCTGATGAATTTATGGACAGTCGACTCGGGCGATCAGGTGACGGTAGGAATGCTTCAAGCAGGTTAAAGAGGAAGAGGTGCGGCCGACT
TATAGAGACTGCGAACATAATTCAAAATGCCATGGAGTACGCCAATGGCCAACTCAACCGCATTGTAGACTGGCTGATTTTAAGGAATCAAGATGCAAGCGTGACACAGC
AGGAGGTTGTTCGACAATTACAGGCCATCCACGAACTTAATTACTAG
Protein sequenceShow/hide protein sequence
MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPNIQATTIDSCIKTMEKTFHAISEIRGPSCSGFSWNDELNYIIVEKDVFDNW
MKGLNMSPDEFMDSRLGRSGDGRNASSRLKRKRCGRLIETANIIQNAMEYANGQLNRIVDWLILRNQDASVTQQEVVRQLQAIHELNY