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IVF0011632 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011632
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr08:11315013..11315180
RNA-Seq ExpressionIVF0011632
SyntenyIVF0011632
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025857.1 retrotransposon protein [Cucumis melo var. makuwa]1.24e-29100Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
KAA0048329.1 retrotransposon protein [Cucumis melo var. makuwa]1.62e-2998.18Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
        MTYC+DVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]9.21e-3094.55Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
        MTYC+DVDDEDEGDSTY TTTASEDIQYIETTNEWSQW DDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]7.90e-3196.36Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
        MTYCDD+DDEDEGDSTYATTTASEDIQYIETTNEWSQW DDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]8.84e-3092.73Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
        MTYCD+VDD+DEGDSTYATTTASEDIQYIETTNEWSQW DDLAESMFTEWQLRN 
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SMB5 Retrotransposon protein4.0e-23100Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
A0A5A7U4G2 Retrotransposon protein1.2e-2298.18Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
        MTYC+DVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
A0A5A7USE5 Retrotransposon protein1.2e-2298.18Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDL ESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
A0A5A7V4Q8 Retrotransposon protein4.4e-2296.36Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
        MTYCDD+DDEDEGDSTYATTTASEDIQYIETTNEWSQW DDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
A0A5D3CHC3 Retrotransposon protein3.4e-2296.36Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
        MTYC+DV+DEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGTGACGACGTTGACGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
ATGGCACGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGTGACGACGTTGACGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
ATGGCACGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAATGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLAESMFTEWQLRNA