; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011647 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011647
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr04:12510083..12510736
RNA-Seq ExpressionIVF0011647
SyntenyIVF0011647
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037969.1 gag/pol protein [Cucumis melo var. makuwa]8.33e-8996.5Show/hide
Query:  MPVALPSVASLSTQNATSSFVKVSDPLSFQRVRLEPPTFVEALPFVSSSLLPRVPSDGAQPSPSHFLKPRTKPEPTQGISSSQPSHTCFSLAHRCLTHLV
        MPVALPSVASLSTQNATSSFVKVSDPLSFQRVRLEPPTFVEALPFVSSSLLPRVPSDGAQPSPSHFLKPRTKPEPTQGISSSQPSHTCFSLAHRCLTHLV
Subjt:  MPVALPSVASLSTQNATSSFVKVSDPLSFQRVRLEPPTFVEALPFVSSSLLPRVPSDGAQPSPSHFLKPRTKPEPTQGISSSQPSHTCFSLAHRCLTHLV

Query:  FCHFCLIVSFEIIQQVPLEFDSPFCLGGFIGLRFKQGFLAISR
        FCHFCLI+    IQQVPLEFDSPFCLGGFIGLRFKQGFLAISR
Subjt:  FCHFCLIVSFEIIQQVPLEFDSPFCLGGFIGLRFKQGFLAISR
TrEMBL top hitse value%identityAlignment
A0A5A7T9G9 Gag/pol protein1.1e-6997.2Show/hide
Query:  MPVALPSVASLSTQNATSSFVKVSDPLSFQRVRLEPPTFVEALPFVSSSLLPRVPSDGAQPSPSHFLKPRTKPEPTQGISSSQPSHTCFSLAHRCLTHLV
        MPVALPSVASLSTQNATSSFVKVSDPLSFQRVRLEPPTFVEALPFVSSSLLPRVPSDGAQPSPSHFLKPRTKPEPTQGISSSQPSHTCFSLAHRCLTHLV
Subjt:  MPVALPSVASLSTQNATSSFVKVSDPLSFQRVRLEPPTFVEALPFVSSSLLPRVPSDGAQPSPSHFLKPRTKPEPTQGISSSQPSHTCFSLAHRCLTHLV

Query:  FCHFCLIVSFEIIQQVPLEFDSPFCLGGFIGLRFKQGFLAISR
        FCHFCLI    IIQQVPLEFDSPFCLGGFIGLRFKQGFLAISR
Subjt:  FCHFCLIVSFEIIQQVPLEFDSPFCLGGFIGLRFKQGFLAISR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGTCGCCCTTCCTTCCGTCGCGTCTCTGTCTACTCAAAACGCCACGTCTTCGTTTGTCAAGGTGAGCGATCCCTTGTCGTTTCAGCGCGTTCGCCTCGAACCTCC
GACGTTTGTTGAAGCCTTACCATTTGTGTCGTCGTCTCTTCTTCCTCGTGTGCCGTCCGATGGAGCACAACCATCGCCGTCACATTTCTTAAAGCCGCGCACTAAACCTG
AGCCGACCCAAGGCATCTCCTCTTCCCAGCCAAGCCACACTTGTTTCTCCCTTGCTCATCGCTGTTTGACTCACTTAGTGTTCTGTCACTTTTGCCTCATTGTAAGTTTT
GAGATTATTCAGCAAGTTCCGTTGGAGTTCGATTCTCCATTTTGCTTGGGTGGATTCATTGGACTTCGATTTAAGCAAGGATTTTTAGCTATATCGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGTCGCCCTTCCTTCCGTCGCGTCTCTGTCTACTCAAAACGCCACGTCTTCGTTTGTCAAGGTGAGCGATCCCTTGTCGTTTCAGCGCGTTCGCCTCGAACCTCC
GACGTTTGTTGAAGCCTTACCATTTGTGTCGTCGTCTCTTCTTCCTCGTGTGCCGTCCGATGGAGCACAACCATCGCCGTCACATTTCTTAAAGCCGCGCACTAAACCTG
AGCCGACCCAAGGCATCTCCTCTTCCCAGCCAAGCCACACTTGTTTCTCCCTTGCTCATCGCTGTTTGACTCACTTAGTGTTCTGTCACTTTTGCCTCATTGTAAGTTTT
GAGATTATTCAGCAAGTTCCGTTGGAGTTCGATTCTCCATTTTGCTTGGGTGGATTCATTGGACTTCGATTTAAGCAAGGATTTTTAGCTATATCGAGGTAA
Protein sequenceShow/hide protein sequence
MPVALPSVASLSTQNATSSFVKVSDPLSFQRVRLEPPTFVEALPFVSSSLLPRVPSDGAQPSPSHFLKPRTKPEPTQGISSSQPSHTCFSLAHRCLTHLVFCHFCLIVSF
EIIQQVPLEFDSPFCLGGFIGLRFKQGFLAISR