; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011658 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011658
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionrRNA 2'-O-methyltransferase fibrillarin 2
Genome locationchr09:12714189..12719950
RNA-Seq ExpressionIVF0011658
SyntenyIVF0011658
Gene Ontology termsGO:0000494 - box C/D snoRNA 3'-end processing (biological process)
GO:1990258 - histone glutamine methylation (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0051225 - spindle assembly (biological process)
GO:0031167 - rRNA methylation (biological process)
GO:0031122 - cytoplasmic microtubule organization (biological process)
GO:0007020 - microtubule nucleation (biological process)
GO:0000278 - mitotic cell cycle (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0000930 - gamma-tubulin complex (cellular component)
GO:0031428 - box C/D snoRNP complex (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0000923 - equatorial microtubule organizing center (cellular component)
GO:0000922 - spindle pole (cellular component)
GO:0008649 - rRNA methyltransferase activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0043015 - gamma-tubulin binding (molecular function)
GO:0051011 - microtubule minus-end binding (molecular function)
GO:1990259 - histone-glutamine methyltransferase activity (molecular function)
InterPro domainsIPR000692 - Fibrillarin
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57431.2 hypothetical protein Csa_009607 [Cucumis sativus]1.04e-77100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVGIYRAPKKQKAAA
Subjt:  ERDHACVVGIYRAPKKQKAAA

TYK00283.1 putative mediator of RNA polymerase II transcription subunit 36b [Cucumis melo var. makuwa]1.14e-7799.17Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVGIYRAPKKQKA A
Subjt:  ERDHACVVGIYRAPKKQKAAA

XP_022922917.1 probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita moschata]1.82e-77100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVGIYRAPKKQKAAA
Subjt:  ERDHACVVGIYRAPKKQKAAA

XP_022984980.1 probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxima]1.82e-77100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVGIYRAPKKQKAAA
Subjt:  ERDHACVVGIYRAPKKQKAAA

XP_023552409.1 mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo]1.88e-77100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVGIYRAPKKQKAAA
Subjt:  ERDHACVVGIYRAPKKQKAAA

TrEMBL top hitse value%identityAlignment
A0A0A0KLF9 Uncharacterized protein3.1e-60100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVGIYRAPKKQKAAA
Subjt:  ERDHACVVGIYRAPKKQKAAA

A0A0A0L9V7 Uncharacterized protein3.1e-60100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVGIYRAPKKQKAAA
Subjt:  ERDHACVVGIYRAPKKQKAAA

A0A1S3AY25 mediator of RNA polymerase II transcription subunit 36a-like3.1e-60100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVGIYRAPKKQKAAA
Subjt:  ERDHACVVGIYRAPKKQKAAA

A0A6J1E4P7 probable mediator of RNA polymerase II transcription subunit 36b3.1e-60100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVGIYRAPKKQKAAA
Subjt:  ERDHACVVGIYRAPKKQKAAA

A0A6J1JA27 probable mediator of RNA polymerase II transcription subunit 36b3.1e-60100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVGIYRAPKKQKAAA
Subjt:  ERDHACVVGIYRAPKKQKAAA

SwissProt top hitse value%identityAlignment
Q80WS3 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 12.5e-4674.58Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        +AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ+RI+ALNA  FL+ GGHF+ISIKANCIDST  AEAVFASEV KL+ +  KP EQ+TLEP+
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQK
        ERDHA VVG+YR P K K
Subjt:  ERDHACVVGIYRAPKKQK

Q8I1F4 rRNA 2'-O-methyltransferase fibrillarin3.8e-4777.78Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        +AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +FLK GGHFVISIKA+CIDST   EAVFASEV K++AD+ KP EQ+TLEP+
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQ
        ERDHA VVG+YR P KQ
Subjt:  ERDHACVVGIYRAPKKQ

Q94AH9 rRNA 2'-O-methyltransferase fibrillarin 24.5e-5690.83Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAA
        ERDHACVVG YR PKK KAA
Subjt:  ERDHACVVGIYRAPKKQKAA

Q9FEF8 rRNA 2'-O-methyltransferase fibrillarin 14.9e-5589.26Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVG YR PKKQK  A
Subjt:  ERDHACVVGIYRAPKKQKAAA

Q9W1V3 rRNA 2'-O-methyltransferase fibrillarin8.4e-4776.92Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        +AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +FLK GGHFVISIKA+CIDST   EAVFA+EV K++AD+ KP EQ+TLEP+
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQ
        ERDHA VVG+YR P KQ
Subjt:  ERDHACVVGIYRAPKKQ

Arabidopsis top hitse value%identityAlignment
AT4G25630.1 fibrillarin 23.2e-5790.83Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAA
        ERDHACVVG YR PKK KAA
Subjt:  ERDHACVVGIYRAPKKQKAA

AT5G52470.1 fibrillarin 13.5e-5689.26Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKKQKAAA
        ERDHACVVG YR PKKQK  A
Subjt:  ERDHACVVGIYRAPKKQKAAA

AT5G52470.2 fibrillarin 12.1e-16100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ

AT5G52490.1 Fibrillarin family protein1.4e-4169.83Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF
        MA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV  P+QA IL+LNASYFLK+GGHF+ISIKAN IDST+ AE V+  EV KL+ ++ +PTE + L+  
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPF

Query:  ERDHACVVGIYRAPKK
        E  HACV G YR P+K
Subjt:  ERDHACVVGIYRAPKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGAAGCGCACTAATGTTATACCCATCATTGAAGATGCCAGACACCCAGCCAAGTACCGGATGTTGGTTGGCATGGTGGATGTAATATTCTCTGATGTTGCTCA
GCCAGATCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAG
AGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATT
TATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG
mRNA sequenceShow/hide mRNA sequence
GTGCTCGAGTGTTATATCTAGGTGCTGCGTCTGGGACTACCGTATCTCATGTCTCTGATGTTGTTGGCCCTACTGGTATTGTGTATGCCGTGGAATTCTCTCATAGAAGT
GGTAGAGATTTGGTCAACATGGCAAAGAAGCGCACTAATGTTATACCCATCATTGAAGATGCCAGACACCCAGCCAAGTACCGGATGTTGGTTGGCATGGTGGATGTAAT
ATTCTCTGATGTTGCTCAGCCAGATCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAG
ACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCAT
GCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAGTTTATACAATAGGATTTGGTAAAAGGCCATTACTGCTTTGAAGAAAGGAGCCTACT
TGCTCAAGTATGGAAGAAGGGGGAAGCCAAAGTTTTGTCCTTTCCGACTTTCCAATGTTACTGATGGAGAGAGATTGCCTTTAGCTGTTAAGGAGATGGGAACTTGTGAT
CTTTATCCTCAAGTAAGTTATTTTACATCTGCGTTTGAATTCTCTGTATATTTTGTCATGAATTGGCTGGATCTATTCCTTTATCTTATAAAAAACCTTTGATTGTAGCC
TCCAGTGATATTTTAATGTTTTCAGTATATATAATGTTTATAGATGTGTATGTCAATATGTTCTTGGCCCCTTTTTCTGCTACTGTTATGTTTTATTCTAAGTCAATGAA
GTTGTTGAGTCTGAGTTCAATTCCCAATTATAGTTTCTTGTAGAGTTGTAGTTACTTGATAGTTACATTAATTCATATACCACGGGTAGAATATGTTTGGCTACCAATTC
AAGTTACATATCAAAGAAGGGGCAAAAAGGTCAGTGGAGGTGAAACCACACAGTCTACCAATTAATTATTACTATTATTTTTACTGCTGGTCTTATCTCTCTC
Protein sequenceShow/hide protein sequence
MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGI
YRAPKKQKAAA