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IVF0011666 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011666
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein EMBRYO DEFECTIVE 514-like
Genome locationchr02:21623198..21625036
RNA-Seq ExpressionIVF0011666
SyntenyIVF0011666
Gene Ontology termsGO:0017126 - nucleologenesis (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021514.1 Protein EMBRYO DEFECTIVE [Cucurbita argyrosperma subsp. argyrosperma]6.68e-8569.01Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKREREES-ADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNW
        MELE+T PK S   SEA EAAPV NGDANSKREREE  ADD  G+ KK K+EKSVEEER+EK+  DGK EEE  PVSLGPKSF SSVELFDYFY  LH W
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKREREES-ADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNW

Query:  PINLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGG
        P NLNVNQ                    IGCG++A QIR+HP+WKSKCFFLIRED SADDFSFRKCVDHILPLPEN K  SDANRALGGGKHRGGGRGGG
Subjt:  PINLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGG

Query:  GGRGRGGGGRWRN
                 RWRN
Subjt:  GGRGRGGGGRWRN

XP_008453205.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]8.47e-12490.57Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP
        MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP

Query:  INLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG
        INLNVNQ                    IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG
Subjt:  INLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG

Query:  GRGRGGGGRWRN
        GRGRGGGGRWRN
Subjt:  GRGRGGGGRWRN

XP_011660085.1 protein EMBRYO DEFECTIVE 514 [Cucumis sativus]6.76e-11483.96Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP
        MELETT PK S+DASEA EAAPVINGDA SKREREESADDGV DGKKQKIEKSVEEER+EKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILH+WP
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP

Query:  INLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG
        +NLNVNQ                    IGCGI +FQIRFHP WKSKCFFLIREDESADDFSFRKCVDHILPLPENFK K DANRALGGGKHRGGGRGGGG
Subjt:  INLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG

Query:  GRGRGGGGRWRN
        GRGRGGGGRWRN
Subjt:  GRGRGGGGRWRN

XP_022933555.1 protein EMBRYO DEFECTIVE 514-like [Cucurbita moschata]6.90e-8569.01Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKREREES-ADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNW
        MELE+T PK S   S+A EAAPV NGDANSKREREE  ADD  G+ KK K+EKSVEEER+EK+  DGK EEE  PVSLGPKSF SSVELFDYFY  LH W
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKREREES-ADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNW

Query:  PINLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGG
        P NLNVNQ                    IGCG++A QIR+HP+WKSKCFFLIRED SADDFSFRKCVDHILPLPEN K  SDANRALGGGKHRGGGRGGG
Subjt:  PINLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGG

Query:  GGRGRGGGGRWRN
        G        RWRN
Subjt:  GGRGRGGGGRWRN

XP_038880608.1 protein EMBRYO DEFECTIVE 514 [Benincasa hispida]4.49e-10078.34Show/hide
Query:  MELETTVP----KGSSDASEATEAAPVINGDANSKREREE-SADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEE-PVPVSLGPKSFRSSVELFDYFYK
        MELETT P    K S++ SEATEA PV NGD+ SKREREE SADDGVGDGKKQKIEKSVEEER EK+GGDGK EEE PV VSLGPKSF+SS+ELFDYFYK
Subjt:  MELETTVP----KGSSDASEATEAAPVINGDANSKREREE-SADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEE-PVPVSLGPKSFRSSVELFDYFYK

Query:  ILHNWPINLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGG
        ILH+WP+NLNVNQ                    IGCGI AFQIR+HPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFK KSDANRALGGGKHRGG
Subjt:  ILHNWPINLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGG

Query:  GRGGGGGRGRGGGGRWR
        GRGGGGGRGRGGG RWR
Subjt:  GRGGGGGRGRGGGGRWR

TrEMBL top hitse value%identityAlignment
A0A0A0LRN9 Uncharacterized protein1.1e-8883.96Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP
        MELETT PK S+DASEA EAAPVINGDA SKREREESADDGV DGKKQKIEKSVEEER+EKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILH+WP
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP

Query:  INLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG
        +NLNVNQ                    IGCGI +FQIRFHP WKSKCFFLIREDESADDFSFRKCVDHILPLPENFK K DANRALGGGKHRGGGRGGGG
Subjt:  INLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG

Query:  GRGRGGGGRWRN
        GRGRGGGGRWRN
Subjt:  GRGRGGGGRWRN

A0A1S3BWT9 protein DCL, chloroplastic3.3e-9690.57Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP
        MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP

Query:  INLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG
        INLNVNQ                    IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG
Subjt:  INLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG

Query:  GRGRGGGGRWRN
        GRGRGGGGRWRN
Subjt:  GRGRGGGGRWRN

A0A5A7UQ03 Protein DCL3.3e-9690.57Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP
        MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP

Query:  INLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG
        INLNVNQ                    IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG
Subjt:  INLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG

Query:  GRGRGGGGRWRN
        GRGRGGGGRWRN
Subjt:  GRGRGGGGRWRN

A0A6J1F569 protein EMBRYO DEFECTIVE 514-like4.6e-6669.01Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKRER-EESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNW
        MELE+T PK S   S+A EAAPV NGDANSKRER EE ADD  G+ KK K+EKSVEEER+EK+  DGK EEE  PVSLGPKSF SSVELFDYFY  LH W
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKRER-EESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNW

Query:  PINLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGG
        P NLNVNQ                    IGCG++A QIR+HP+WKSKCFFLIRED SADDFSFRKCVDHILPLPEN K  SDANRALGGGKHRGG     
Subjt:  PINLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGG

Query:  GGRGRGGGGRWRN
           GRGGGGRWRN
Subjt:  GGRGRGGGGRWRN

A0A6J1IBL1 protein EMBRYO DEFECTIVE 514-like3.9e-6568.54Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKRER-EESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNW
        MELE+T PK S   S+A EAAPV NGDANSKRER EE A D VG+ KK K+EKSVEEER+EK+  DGK EEE  PVSLGPKSF SSVELF+YFY  LH W
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKRER-EESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNW

Query:  PINLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGG
        P NLNVNQ                    IGCG++A QIR+HP+WKSKCFFLIRED SADDFSFRKCVDHILPLPEN K  SDANRALGGGKHRGG     
Subjt:  PINLNVNQ--------------------IGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGG

Query:  GGRGRGGGGRWRN
           GRGGGGRWRN
Subjt:  GGRGRGGGGRWRN

SwissProt top hitse value%identityAlignment
Q8L557 Protein EMBRYO DEFECTIVE 5142.4e-3245.02Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP
        ME+ET  PK  +             GD   +RE  E  ++G G+ KKQK+ +                EE+  PV LGPK F +SV +FDYF K LH WP
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP

Query:  INLNVN--------------------QIGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG
         +L+VN                    +IG GI+ FQ+R HP+WKS+CFFL+RED++ADDFSFRKCVD ILPLPEN K         GGG  RGGG G  G
Subjt:  INLNVN--------------------QIGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG

Query:  GRGRGGGGRWR
        GRG G GGR+R
Subjt:  GRGRGGGGRWR

Arabidopsis top hitse value%identityAlignment
AT5G62440.1 Protein of unknown function (DUF3223)1.7e-3345.02Show/hide
Query:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP
        ME+ET  PK  +             GD   +RE  E  ++G G+ KKQK+ +                EE+  PV LGPK F +SV +FDYF K LH WP
Subjt:  MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWP

Query:  INLNVN--------------------QIGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG
         +L+VN                    +IG GI+ FQ+R HP+WKS+CFFL+RED++ADDFSFRKCVD ILPLPEN K         GGG  RGGG G  G
Subjt:  INLNVN--------------------QIGCGIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGG

Query:  GRGRGGGGRWR
        GRG G GGR+R
Subjt:  GRGRGGGGRWR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGGAAACAACGGTACCGAAAGGTTCAAGTGATGCTTCTGAAGCAACTGAGGCCGCTCCAGTAATTAATGGCGATGCTAATTCGAAGCGAGAGAGGGAGGAAAG
CGCCGATGATGGCGTCGGCGATGGGAAGAAGCAGAAGATAGAGAAATCAGTTGAGGAGGAAAGGGTTGAGAAGTTGGGTGGAGACGGGAAGTGTGAGGAGGAACCTGTTC
CTGTTAGTTTAGGCCCCAAGAGCTTTCGATCATCGGTGGAATTGTTCGATTACTTCTATAAGATCCTTCACAACTGGCCTATCAACTTGAACGTGAACCAGATTGGCTGC
GGTATTCAGGCCTTTCAAATTCGTTTCCATCCTGTGTGGAAAAGCAAGTGCTTCTTCCTCATCAGGGAGGATGAGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTTGA
TCATATCCTTCCTCTGCCTGAAAACTTCAAAGCAAAATCTGATGCAAACAGAGCATTAGGCGGTGGGAAGCACCGTGGTGGAGGACGAGGTGGGGGTGGTGGACGTGGAA
GAGGAGGAGGGGGTAGGTGGAGAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGGAAACAACGGTACCGAAAGGTTCAAGTGATGCTTCTGAAGCAACTGAGGCCGCTCCAGTAATTAATGGCGATGCTAATTCGAAGCGAGAGAGGGAGGAAAG
CGCCGATGATGGCGTCGGCGATGGGAAGAAGCAGAAGATAGAGAAATCAGTTGAGGAGGAAAGGGTTGAGAAGTTGGGTGGAGACGGGAAGTGTGAGGAGGAACCTGTTC
CTGTTAGTTTAGGCCCCAAGAGCTTTCGATCATCGGTGGAATTGTTCGATTACTTCTATAAGATCCTTCACAACTGGCCTATCAACTTGAACGTGAACCAGATTGGCTGC
GGTATTCAGGCCTTTCAAATTCGTTTCCATCCTGTGTGGAAAAGCAAGTGCTTCTTCCTCATCAGGGAGGATGAGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTTGA
TCATATCCTTCCTCTGCCTGAAAACTTCAAAGCAAAATCTGATGCAAACAGAGCATTAGGCGGTGGGAAGCACCGTGGTGGAGGACGAGGTGGGGGTGGTGGACGTGGAA
GAGGAGGAGGGGGTAGGTGGAGAAACTGA
Protein sequenceShow/hide protein sequence
MELETTVPKGSSDASEATEAAPVINGDANSKREREESADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILHNWPINLNVNQIGC
GIQAFQIRFHPVWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGGGRGRGGGGRWRN