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IVF0011678 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011678
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCold-regulated 413 plasma membrane protein 2-like protein
Genome locationchr08:3174917..3176708
RNA-Seq ExpressionIVF0011678
SyntenyIVF0011678
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142025.1 cold-regulated 413 plasma membrane protein 2 [Cucumis sativus]4.22e-5096.39Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLLVPYIFFSLPQGIFNLLRGD GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGV+ICLI+
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

XP_008440182.1 PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo]3.67e-5198.8Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLI+
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

XP_022133246.1 cold-regulated 413 plasma membrane protein 2-like [Momordica charantia]2.59e-4689.16Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLLVPYIFFSLPQGIF+LLR D GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILL+VA PGFFAHTL+DHWAGV+ICL++
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

XP_022962766.1 cold-regulated 413 plasma membrane protein 2 isoform X2 [Cucurbita moschata]1.09e-4487.95Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLLVPYIFFSLP+GIF+L+RGD GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVA PGFF H+LRDH AGV+ICLI+
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

XP_038883183.1 cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida]8.48e-5096.39Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLLVPYIFFSLPQGIF+LLRGD GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLI+
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

TrEMBL top hitse value%identityAlignment
A0A0A0KFI4 Uncharacterized protein6.4e-3996.39Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLLVPYIFFSLPQGIFNLLRGD GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGV+ICLI+
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

A0A1S3B0J4 cold-regulated 413 plasma membrane protein 2-like9.9e-4098.8Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLI+
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

A0A5D3CRA7 Cold-regulated 413 plasma membrane protein 2-like protein9.9e-4098.8Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLI+
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

A0A6J1BUH1 cold-regulated 413 plasma membrane protein 2-like5.1e-3689.16Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLLVPYIFFSLPQGIF+LLR D GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILL+VA PGFFAHTL+DHWAGV+ICL++
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

A0A6J1KS22 cold-regulated 413 plasma membrane protein 25.6e-3589.16Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLLVPYIFFSLPQGIF+L+RGD GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVA PGFF H+LRDH AGV+ICLI+
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic5.8e-0531.63Show/hide
Query:  SLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIMDVTFSKSTFVHLVASETL
        S +VP      P GI + ++G+ G W AF+A++ RLFF   FP  LE+P   +LL++  P +   ++R    G ++ L +    +   F H   + TL
Subjt:  SLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIMDVTFSKSTFVHLVASETL

O23164 Cold-regulated 413 plasma membrane protein 46.6e-2559.04Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLT+LLVPYIFF+LP  IF    GD GKWIA +A+++RLFFP+ FP+WLEIP +LIL++V +P   A TLR+ W G +ICL++
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

O64834 Cold-regulated 413 plasma membrane protein 37.3e-1651.19Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRD--HWAGVLICLI
        ++ SLL PY+F SLP  IF +LR  VGKWIA + V+LRLF P HF + LEIPG+ ILL+V TP       RD   + G  +CL+
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRD--HWAGVLICLI

Q9SVL6 Cold-regulated 413 plasma membrane protein 22.0e-2973.49Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLL+PYIF SLP  IFN L GDVGKWIAFVAVVLRLFFP+HFPDWLE+PGSLILLLV +P F AH +R  W G +I L +
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

Q9XIM7 Cold-regulated 413 plasma membrane protein 11.3e-2361.73Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICL
        MLTSLL+PYIFFSLP  IF + RG++GKWIAFVAVV++LFFP+H  ++LE+P +L+LL V  P   A T RD W G+ ICL
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICL

Arabidopsis top hitse value%identityAlignment
AT2G15970.1 cold regulated 413 plasma membrane 18.9e-2561.73Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICL
        MLTSLL+PYIFFSLP  IF + RG++GKWIAFVAVV++LFFP+H  ++LE+P +L+LL V  P   A T RD W G+ ICL
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICL

AT2G15970.2 cold regulated 413 plasma membrane 11.4e-2557.61Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIMDVTFSKSTF
        MLTSLL+PYIFFSLP  IF + RG++GKWIAFVAVV++LFFP+H  ++LE+P +L+LL V  P   A T RD W G+ ICL +  +FS   F
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIMDVTFSKSTF

AT2G23680.1 Cold acclimation protein WCOR413 family5.2e-1751.19Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRD--HWAGVLICLI
        ++ SLL PY+F SLP  IF +LR  VGKWIA + V+LRLF P HF + LEIPG+ ILL+V TP       RD   + G  +CL+
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRD--HWAGVLICLI

AT3G50830.1 cold-regulated 413-plasma membrane 21.4e-3073.49Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLTSLL+PYIF SLP  IFN L GDVGKWIAFVAVVLRLFFP+HFPDWLE+PGSLILLLV +P F AH +R  W G +I L +
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM

AT4G37220.1 Cold acclimation protein WCOR413 family4.7e-2659.04Show/hide
Query:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM
        MLT+LLVPYIFF+LP  IF    GD GKWIA +A+++RLFFP+ FP+WLEIP +LIL++V +P   A TLR+ W G +ICL++
Subjt:  MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACTTCACTTCTTGTCCCTTACATTTTCTTCAGTCTTCCTCAAGGGATTTTTAACTTATTGAGAGGGGATGTTGGGAAATGGATTGCTTTCGTTGCAGTGGTATT
GAGGCTCTTCTTTCCGCGACATTTCCCAGATTGGTTGGAGATTCCAGGGTCATTGATTCTGCTTCTAGTGGCAACACCAGGGTTCTTTGCACATACCTTGAGAGACCACT
GGGCTGGGGTACTGATATGTTTGATAATGGATGTTACCTTCTCCAAGAGCACATTCGTGCATCTGGTGGCTTCAGAAACTCTTTTACTCAAACTCATGGAATTTCCAATA
CCATTGGAATCGTCCTCCTCCTTGTGTTCCCTGTTTGGGCCATGGTTGCTCGTTTCTTCTAGCTCTCTATACAACTCTCTCCCTTCCCATTTCTTCAATTTTGCAGCTCT
CCCTTTGCAAAACTGA
mRNA sequenceShow/hide mRNA sequence
CGATTTTAAACTATAAAATGCATTCTAGGTGTTTGTATAAATGCCGCACTGGCTCTTGTTTCCCAAAGCTTTCTCATTTTTCGTTTCCTTGTAGACCCAGAAGCAAAAAT
GGGGAGGATGGCGTATTTGGCTCTCAATAGTGATCCTCTAATGGAGGAGTTGATTAATTCTGATATCCATGAGCTTAAAATTGCAGCCACTAGGCTTATTGAACATGCCA
CCAAGCTCGGTGGAAAGGGTCTTGGCACTTCCTTTTCAAATGGCTCGCTTCCTTTGCTGCCATTTACTTGTTGATTTTGGATCGTACGAACTGGAGAACAAATATGCTTA
CTTCACTTCTTGTCCCTTACATTTTCTTCAGTCTTCCTCAAGGGATTTTTAACTTATTGAGAGGGGATGTTGGGAAATGGATTGCTTTCGTTGCAGTGGTATTGAGGCTC
TTCTTTCCGCGACATTTCCCAGATTGGTTGGAGATTCCAGGGTCATTGATTCTGCTTCTAGTGGCAACACCAGGGTTCTTTGCACATACCTTGAGAGACCACTGGGCTGG
GGTACTGATATGTTTGATAATGGATGTTACCTTCTCCAAGAGCACATTCGTGCATCTGGTGGCTTCAGAAACTCTTTTACTCAAACTCATGGAATTTCCAATACCATTGG
AATCGTCCTCCTCCTTGTGTTCCCTGTTTGGGCCATGGTTGCTCGTTTCTTCTAGCTCTCTATACAACTCTCTCCCTTCCCATTTCTTCAATTTTGCAGCTCTCCCTTTG
CAAAACTGAAGTAAAAGATTTTGTAACTTCTTTGTTCTTTTCTTTGTAGCCCTCTTTATCTATATATCATCAATATGAGAAATTGAGTTTTTGTTGTTC
Protein sequenceShow/hide protein sequence
MLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIMDVTFSKSTFVHLVASETLLLKLMEFPI
PLESSSSLCSLFGPWLLVSSSSLYNSLPSHFFNFAALPLQN