CuGenDBv2

Gene ID	IVF0011716
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Kinetochore protein NDC80-like protein
Genome location	chr03:21735120..21736203
RNA-Seq Expression	IVF0011716
Synteny	IVF0011716
Gene Ontology terms	GO:0051301 - cell division (biological process) GO:0051315 - attachment of mitotic spindle microtubules to kinetochore (biological process) GO:0031262 - Ndc80 complex (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064728.1 kinetochore protein NDC80-like protein [Cucumis melo var. makuwa]

1.50e-56

100

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALLS
        MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALLS
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALLS

KAG6576966.1 Kinetochore protein NDC80-like protein, partial [Cucurbita argyrosperma subsp. sororia]

6.59e-33

70.65

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALL
        MVED Q EAH++D++E+E   +LKNA +KH+EAIKQG+EEI +CARE+V+CVD VSQYKEF+ SKISDM+S LS TAVGISEAYKNS PA L
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALL

XP_022984383.1 kinetochore protein NDC80 homolog [Cucurbita maxima]

9.44e-34

72.83

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALL
        MVED Q EAH++D++E+E   ILKNA LKH+EAIKQG+EEI +CARE+V+CVD VSQYKEF+ SKISDM+S LS TAVGISEAYKNS PA L
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALL

XP_023553517.1 kinetochore protein NDC80 homolog [Cucurbita pepo subsp. pepo]

1.81e-33

72.83

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALL
        MVED Q EAH++D++E E   ILKNA LKH+EAIKQG+EEI +CARE+V+CVD VSQYKEF+ SKISDM+S LS TAVGISEAYKNS PA L
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALL

XP_038884546.1 kinetochore protein NDC80 homolog [Benincasa hispida]

3.21e-37

78.02

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPAL
        MVED QQ+AHNLDL+E+E    LKNA LKH+EAIKQG+EEIQ+CARE+VSCVD VS+YKEF+  KISDMKSYLSN AVGISEAYKNS PAL
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPAL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L740 Uncharacterized protein

1.6e-24

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPA
        MVED QQEAHNLDL+E E    LKNA L HQEAIKQG+EEI MCARE++SC+D VSQYK  +  KISDM+S LS  A GISEA+KNS PA
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPA

A0A5A7VAV7 Kinetochore protein NDC80-like protein

1.9e-41

100

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALLS
        MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALLS
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALLS

A0A6J1D5D4 kinetochore protein NDC80 homolog

6.5e-26

71.11

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPA
        MVED +QEAHNLDL+E+E   ILKNA LKHQEA+KQ +EEIQ+CARE+++ VD VS+Y+E + SKISDMKS LS TA+GISEAYKNS PA
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPA

A0A6J1E5Y9 kinetochore protein NDC80 homolog

1.3e-26

70.65

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALL
        MVED Q EAH++D++E+E   +LKNA +KH+EAIKQG+EEI +CARE+V+CVD VSQYKEF+ SKISDM+S LS TAVGISEAYKNS PA L
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALL

A0A6J1JAC2 kinetochore protein NDC80 homolog

2.7e-27

72.83

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALL
        MVED Q EAH++D++E+E   ILKNA LKH+EAIKQG+EEI +CARE+V+CVD VSQYKEF+ SKISDM+S LS TAVGISEAYKNS PA L
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALL

SwissProt top hits

e value

%identity

Alignment

Q9M1G5 Kinetochore protein NDC80 homolog

1.2e-13

42.35

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYK
        +VE  + EA NL+++EKE A  +K + L+ QEA+K+ +EE+Q CA ++ + +D +S+ KE++ SKIS++K+ +++TA  +SE YK
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYK

Arabidopsis top hits

e value

%identity

Alignment

AT3G54630.1 CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink).

8.8e-15

42.35

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Query:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYK
        +VE  + EA NL+++EKE A  +K + L+ QEA+K+ +EE+Q CA ++ + +D +S+ KE++ SKIS++K+ +++TA  +SE YK
Subjt:  MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYK

Sequences

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CDS sequence

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ATGGTGGAGGATGCTCAACAAGAAGCGCACAATTTGGATCTTCTGGAAAAAGAAACAGCAGTGATTTTAAAGAATGCCAATTTGAAGCATCAGGAAGCTATAAAGCAAGG
ACAGGAAGAAATTCAGATGTGTGCTCGTGAAATAGTGTCATGTGTTGACTATGTCTCACAATATAAAGAATTTATTGGATCCAAAATTTCAGATATGAAAAGCTACCTCT
CAAACACTGCTGTCGGTATCTCTGAGGCTTACAAGAATTCTTCGCCTGCACTGCTTAGTTAG

mRNA sequence

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Protein sequence

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MVEDAQQEAHNLDLLEKETAVILKNANLKHQEAIKQGQEEIQMCAREIVSCVDYVSQYKEFIGSKISDMKSYLSNTAVGISEAYKNSSPALLS

IVF0011716 (gene) of Melon (IVF77) v1 genome