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IVF0011767 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011767
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionkeratin, type II cytoskeletal 3 isoform X1
Genome locationchr09:1039279..1042444
RNA-Seq ExpressionIVF0011767
SyntenyIVF0011767
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003724 - RNA helicase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141514.1 glycine-rich cell wall structural protein 1 [Cucumis sativus]7.01e-9597.92Show/hide
Query:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRN+DGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
        GDVLRG QSIFPHQDDIGALVDDLVLNTKRLIRATS+EIDKWKR
Subjt:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

XP_016902400.1 PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo]3.61e-97100Show/hide
Query:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
        GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
Subjt:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

XP_022932819.1 keratin, type II cytoskeletal 2 epidermal isoform X1 [Cucurbita moschata]3.18e-8285.42Show/hide
Query:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R+  GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L G QSIFPH+D+IGALVD+L LNTK+LIR T++EIDKWKR
Subjt:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

XP_023521208.1 ATP-dependent RNA helicase glh-2 isoform X1 [Cucurbita pepo subsp. pepo]7.81e-8386.11Show/hide
Query:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R+   EDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L GHQSIFPH+D+IGALVD+L LNTK+LIR T+REIDKWKR
Subjt:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

XP_038889093.1 ctenidin-1 isoform X1 [Benincasa hispida]3.45e-8690.97Show/hide
Query:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRN NGNR++ GEDE GLLWNLPVLKSSRFG LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L GHQSIFP +DDI ALVD+LVLN+KRLIRATSREIDKWKR
Subjt:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

TrEMBL top hitse value%identityAlignment
A0A0A0KSM8 Uncharacterized protein2.9e-7397.92Show/hide
Query:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRN+DGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
        GDVLRG QSIFPHQDDIGALVDDLVLNTKRLIRATS+EIDKWKR
Subjt:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

A0A1S4E347 glycine-rich cell wall structural protein 15.3e-75100Show/hide
Query:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
        GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
Subjt:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

A0A6J1EY31 keratin, type II cytoskeletal 2 epidermal isoform X11.2e-6385.42Show/hide
Query:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R+  GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L G QSIFPH+D+IGALVD+L LNTK+LIR T++EIDKWKR
Subjt:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

A0A6J1F360 keratin, type II cytoskeletal 2 epidermal isoform X28.8e-6285.42Show/hide
Query:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R+  GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L G QSIFP QD+IGALVD+L LNTK+LIR T++EIDKWKR
Subjt:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

A0A6J1ICW2 keratin, type II cytoskeletal 3 isoform X17.9e-6384.03Show/hide
Query:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R   GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L G QSIFPH+D+IGA+VD+L LNTK+LI+ T++EIDKWKR
Subjt:  GDVLRGHQSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27695.1 glycine-rich protein7.5e-0555.17Show/hide
Query:  SRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVG
        S F  +G  FG GVGC  GFG+G     GFG G+P   LG G G GCGVGLG G+G G
Subjt:  SRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVG

AT1G27695.2 glycine-rich protein7.5e-0555.17Show/hide
Query:  SRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVG
        S F  +G  FG GVGC  GFG+G     GFG G+P   LG G G GCGVGLG G+G G
Subjt:  SRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVG

AT1G66820.1 glycine-rich protein7.2e-0851.43Show/hide
Query:  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGVGLGFGYGVGRGIAQDD-KRRY
        +GP  G G+GCG G GIGL GG G G    GL      LGFG+G G G G G+G+GVG G + DD K R+
Subjt:  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGVGLGFGYGVGRGIAQDD-KRRY

AT4G10330.1 glycine-rich protein1.4e-4057.78Show/hide
Query:  NRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGH
        NR R G+D++GLLW LP ++    G +GPAFGLGVGCG GFG GL+GG GFGPG+PGLQ G G GAGCG+G+GFGYGVGRG A D  R Y NVG      
Subjt:  NRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGH

Query:  QSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKW
            P  +++ +L+D+LV++TK+L++AT+ EIDKW
Subjt:  QSIFPHQDDIGALVDDLVLNTKRLIRATSREIDKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACGAAATATGAACGGAAACAGAAACCGAGACGGAGAAGATGAGAGAGGATTATTGTGGAATCTTCCAGTTCTTAAATCTTCCAGATTCGGAAATTTAGGTCCCGC
CTTCGGTCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAGCTTGGCTTTGGTCTTGGTGCTG
GATGTGGAGTTGGCTTAGGATTTGGCTATGGTGTTGGCAGGGGCATTGCCCAAGATGACAAACGCAGATACTCTAATGTTGGGGATGTATTGCGCGGTCATCAAAGTATT
TTTCCTCATCAGGACGATATCGGCGCGCTTGTTGACGACCTTGTCCTAAATACAAAGAGGCTTATCCGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
GTGAAATAATTTGTTTATATCATACTCTCCTTCATTCGCAGGAGGAGGAACAAACAAATCAGAAATGCCACGAAATATGAACGGAAACAGAAACCGAGACGGAGAAGATG
AGAGAGGATTATTGTGGAATCTTCCAGTTCTTAAATCTTCCAGATTCGGAAATTTAGGTCCCGCCTTCGGTCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTC
GTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAGCTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGCTATGGTGTTGGCAGGGGCAT
TGCCCAAGATGACAAACGCAGATACTCTAATGTTGGGGATGTATTGCGCGGTCATCAAAGTATTTTTCCTCATCAGGACGATATCGGCGCGCTTGTTGACGACCTTGTCC
TAAATACAAAGAGGCTTATCCGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGAAATTACTCATTTGTTATTACATTGTACAAGTGATCTATTAGGAAGAACCAC
AATCAAAACTGAAGAAAAAAGAAACGTGCTGGCTGTCTACGTGGCTTTTAGAGGTAGAATTTATGTACAATTGTTTAGAAAGATGTATTTAATTGCTCTAAATCTCATAT
GCATTGGATTTTGAGCAATCTTAAAATGCCGAATACTTAATGTATTATCGTAGGGGTCCCTAGATGGCAGATTTATCATGTCCATTCTCCAGAAAGAAAGAAAAAAACCC
TTTTTATTATACTTGTTCATTTTAAGCTTTTTCTGGTTGATTATA
Protein sequenceShow/hide protein sequence
MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSI
FPHQDDIGALVDDLVLNTKRLIRATSREIDKWKR