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IVF0011788 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011788
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr03:12812306..12812509
RNA-Seq ExpressionIVF0011788
SyntenyIVF0011788
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033880.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.12e-2366.67Show/hide
Query:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN
        +TCC LHNLINR+MTN DIL+D D+ DSTH TT+GDDI  IE  N+WTQWRD LA  MF++W+L N
Subjt:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN

KAA0035628.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.44e-2365.15Show/hide
Query:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN
        +TCC LHNLINR+MTN DI ++ D+ DSTHATT+ DDI  IE SN+W+QWRD LA  MF+EW+L N
Subjt:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN

KAA0038275.1 retrotransposon protein [Cucumis melo var. makuwa]8.41e-2675.76Show/hide
Query:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN
        M CC LHNLINR++T  + L+DED GDSTHATTSGDDIT IE SN+WT+WRDALASSMF EWQL N
Subjt:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN

KAA0048149.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.15e-2675.76Show/hide
Query:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN
        M CC LHNLINR+M+  + L+DED GDSTHATTSGDDIT IE SN+WT+WRDALASSMF EWQL N
Subjt:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN

XP_008444024.1 PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo]6.91e-2675.76Show/hide
Query:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN
        M CC LHNLINR++T  + L+DED GDSTHATTSGDDIT IE SN+WT+WRDALASSMF EWQL N
Subjt:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN

TrEMBL top hitse value%identityAlignment
A0A1S3B9E4 uncharacterized protein LOC1034874736.6e-2075.76Show/hide
Query:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN
        M CC LHNLINR++T  + L+DED GDSTHATTSGDDIT IE SN+WT+WRDALASSMF EWQL N
Subjt:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN

A0A5A7TA66 Retrotransposon protein6.6e-2075.76Show/hide
Query:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN
        M CC LHNLINR++T  + L+DED GDSTHATTSGDDIT IE SN+WT+WRDALASSMF EWQL N
Subjt:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN

A0A5A7U3X6 Putative nuclease HARBI15.0e-2075.76Show/hide
Query:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN
        M CC LHNLINR+M+  + L+DED GDSTHATTSGDDIT IE SN+WT+WRDALASSMF EWQL N
Subjt:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN

A0A5D3BQ11 Putative nuclease HARBI13.1e-1766.67Show/hide
Query:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN
        +TCC LHNLINR+MTN DIL+D D+ DSTH TT+GDDI  IE  N+WTQWRD LA  MF++W+L N
Subjt:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYN

A0A5D3DG22 Retrotransposon protein2.3e-1765.62Show/hide
Query:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQL
        M CC LHNLINR+MTNS+I++D D+GDST+ATT GD+I  IEASN+W++WRD LA +MF++W+L
Subjt:  MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTGTTGTTTCCTCCATAATTTAATAAATCGTAAGATGACGAACTCCGACATATTGAATGACGAAGATAAGGGTGACTCAACACACGCAACTACTAGTGGTGACGA
CATCACAAACATTGAGGCCTCAAACAAATGGACTCAATGGCGGGATGCACTTGCTTCATCGATGTTCAACGAATGGCAGTTGTATAACGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTGTTGTTTCCTCCATAATTTAATAAATCGTAAGATGACGAACTCCGACATATTGAATGACGAAGATAAGGGTGACTCAACACACGCAACTACTAGTGGTGACGA
CATCACAAACATTGAGGCCTCAAACAAATGGACTCAATGGCGGGATGCACTTGCTTCATCGATGTTCAACGAATGGCAGTTGTATAACGGGTAG
Protein sequenceShow/hide protein sequence
MTCCFLHNLINRKMTNSDILNDEDKGDSTHATTSGDDITNIEASNKWTQWRDALASSMFNEWQLYNG