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IVF0011807 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011807
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr04:15451074..15451256
RNA-Seq ExpressionIVF0011807
SyntenyIVF0011807
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067084.1 gag/pol protein [Cucumis melo var. makuwa]2.22e-1274.55Show/hide
Query:  MGGRQIVAEEKSGLARGIMTEGGRQIRPEVRESDVEDGRRQATAQM-GVEKLGIL
        +GGRQI+ EEKSGL  G    G +QIR EVRESDVEDGRRQATAQM GVEKLG+L
Subjt:  MGGRQIVAEEKSGLARGIMTEGGRQIRPEVRESDVEDGRRQATAQM-GVEKLGIL
TYK26319.1 gag/pol protein [Cucumis melo var. makuwa]2.23e-1274.55Show/hide
Query:  MGGRQIVAEEKSGLARGIMTEGGRQIRPEVRESDVEDGRRQATAQM-GVEKLGIL
        +GGRQI+ EEKSGL  G    G +QIR EVRESDVEDGRRQATAQM GVEKLG+L
Subjt:  MGGRQIVAEEKSGLARGIMTEGGRQIRPEVRESDVEDGRRQATAQM-GVEKLGIL
TrEMBL top hitse value%identityAlignment
A0A5A7VI97 Gag/pol protein5.5e-1074.55Show/hide
Query:  MGGRQIVAEEKSGLARGIMTEGGRQIRPEVRESDVEDGRRQATAQM-GVEKLGIL
        +GGRQI+ EEKSGL  G    G +QIR EVRESDVEDGRRQATAQM GVEKLG+L
Subjt:  MGGRQIVAEEKSGLARGIMTEGGRQIRPEVRESDVEDGRRQATAQM-GVEKLGIL
A0A5D3DS88 Gag/pol protein5.5e-1074.55Show/hide
Query:  MGGRQIVAEEKSGLARGIMTEGGRQIRPEVRESDVEDGRRQATAQM-GVEKLGIL
        +GGRQI+ EEKSGL  G    G +QIR EVRESDVEDGRRQATAQM GVEKLG+L
Subjt:  MGGRQIVAEEKSGLARGIMTEGGRQIRPEVRESDVEDGRRQATAQM-GVEKLGIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGAAGACAAATCGTGGCGGAAGAGAAATCGGGGCTAGCGCGCGGAATTATGACCGAGGGCGGAAGACAAATCAGGCCGGAAGTGCGTGAGTCGGACGTAGAAGA
TGGAAGGAGACAGGCGACCGCGCAAATGGGGGTTGAGAAATTAGGGATTTTATGTTTTAATCAATTAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGAAGACAAATCGTGGCGGAAGAGAAATCGGGGCTAGCGCGCGGAATTATGACCGAGGGCGGAAGACAAATCAGGCCGGAAGTGCGTGAGTCGGACGTAGAAGA
TGGAAGGAGACAGGCGACCGCGCAAATGGGGGTTGAGAAATTAGGGATTTTATGTTTTAATCAATTAATTTAA
Protein sequenceShow/hide protein sequence
MGGRQIVAEEKSGLARGIMTEGGRQIRPEVRESDVEDGRRQATAQMGVEKLGILCFNQLI