| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 0.0 | 91.16 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKH L+P+ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEEHKTRLKERL CEPSE+QLAISL+ISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| XP_004151855.1 RNA polymerase sigma factor sigA [Cucumis sativus] | 0.0 | 93.52 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSSANFSP YP SNRHSQQCIKAVKEHVETPSSP AEPW NTT WED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+EKTLKKVPVTCSGVSARQRRMSSKRKIQSKH LRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEE KTRLK+RLGCEPSEDQLAISLKISRAELRSRMME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 0.0 | 97.84 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH LRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAMLIKH
Subjt: KMEAMLIKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 0.0 | 91.36 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD+PR KT KKVPVTCSGVSARQRRMSSKRKIQSKH L+P+ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEEHKTRLKERL CEPSE+QLAISL+ISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 0.0 | 94.71 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYAN-DYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILY N D+RLGQTQVSPTKSVVIAKSSANFSPSYP SNRHSQ CIKAVKEHV+TPSSPTAEPWL NTTIWE
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYAN-DYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVK
DEE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKH LRPTISPELLQNRLKGYVK
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVK
Query: GLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Query: RKMEAMLIKH
RKMEAML+KH
Subjt: RKMEAMLIKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LQR2 RNA_pol_sigma70 domain-containing protein | 2.7e-259 | 93.52 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSSANFSP YP SNRHSQQCIKAVKEHVETPSSP AEPW NTT WED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+EKTLKKVPVTCSGVSARQRRMSSKRKIQSKH LRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEE KTRLK+RLGCEPSEDQLAISLKISRAELRSRMME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| A0A1S4E4N5 RNA polymerase sigma factor sigA | 7.8e-275 | 97.84 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH LRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAMLIKH
Subjt: KMEAMLIKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 7.8e-275 | 97.84 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH LRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAMLIKH
Subjt: KMEAMLIKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 6.4e-253 | 90.96 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDF EK+LYAND+RLGQ+QVSPTKSVVIAKSSANFSPS+P SNRH+ QCIKAVKEHV+TPSSPT EPWL N+T WED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD R +T KKVPVTCSGVSARQRRMSSKRKIQSK+ LR TISPELLQ RLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISR ELRSR++ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 3.2e-252 | 90.77 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TK VVIAK SA+FSPSY SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKH L+P ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKH-----------LRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEEHKTRLKERL C+PSE+QLAISL+ISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O22056 RNA polymerase sigma factor sigB | 6.3e-40 | 33.97 | Show/hide |
Query: EKTLKKVPVTCSGVSARQRRMSSKRKIQS---KHLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLA
EKT +P +G S +++R+ ++ + ++LR T S S +LL+ E LS I+ L LE +T L ER G +P+ Q A
Subjt: EKTLKKVPVTCSGVSARQRRMSSKRKIQS---KHLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLA
Query: ISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTH
+ + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H
Subjt: ISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTH
Query: LHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVN
+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD P T IL + +++
Subjt: LHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVN
Query: KLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLI
K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: KLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLI
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| O24629 RNA polymerase sigma factor sigA | 1.9e-193 | 70.55 | Show/hide |
Query: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
MAT A+IGL KRLL+SS Y+SD TEK L ND+ Q ++ TKS + AK ++N+SPS+P SNRH+Q KA+KE V+ S T +PWLPN T E
Subjt: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHLRPTISPELLQNRLKGYVKGLLS
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K H++ +S +++GYVKG++S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHLRPTISPELLQNRLKGYVKGLLS
Query: EELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGL
E++LSH EVVRLSKKIK GL L++HK+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+DLVQGGLIGL
Subjt: EELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGL
Query: LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFP
LRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+SKVFSLDR+AFP
Subjt: LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFP
Query: SLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKME
SLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKLK AA+ RKME
Subjt: SLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKME
Query: AMLIKH
AM++K+
Subjt: AMLIKH
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| P26683 RNA polymerase sigma factor SigA | 1.7e-40 | 33.82 | Show/hide |
Query: SGVSARQRRMSSKRKIQSKHLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRM
SG +A+ RR + +K KH ++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+
Subjt: SGVSARQRRMSSKRKIQSKHLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRM
Query: MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKV
A++K+ SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+
Subjt: MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKV
Query: KLQEKGITPSLDRIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDRER
QE G P+ + IA + M+ +K+ K+A IS + +E L GET ++ N +L+ ++ K+++ +L RER
Subjt: KLQEKGITPSLDRIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDRER
Query: EIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLK
+++RL +GLD+ T EEI + ++RER+RQ+ AL KL+
Subjt: EIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 4.8e-40 | 35.14 | Show/hide |
Query: QNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGA
++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ E R R+ A++K+ SN+RLV+SIA++Y N G
Subjt: QNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGA
Query: EMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLDRIAESLNMSKKKV----K
DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ + IA + M+ +K+ K
Subjt: EMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLDRIAESLNMSKKKV----K
Query: NATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRER
+A IS + +E L GET +A N +L+ ++ +++ TL RER+++RL +GLD+ T EEI + ++RER
Subjt: NATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRER
Query: VRQVGLVALEKLK
+RQ+ AL KL+
Subjt: VRQVGLVALEKLK
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| Q0J7T6 RNA polymerase sigma factor sigA | 4.9e-133 | 52.49 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYP--------------LSNRHSQQCIKAVKEHVE-----
M AT A+IGL A RLL++S F L + LG + +F+P P LS Q ++A++ H
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYP--------------LSNRHSQQCIKAVKEHVE-----
Query: TPSSPTAEPWLPNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDMPREKTLK-KVPVTCSGVSARQRRMSSKRKIQSKH--LRPT
P P P P+ DL+ ++EA++LLQ+SMLEKQW L F+ + + T K V V S VSARQRRMS +R+ ++K+
Subjt: TPSSPTAEPWLPNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDMPREKTLK-KVPVTCSGVSARQRRMSSKRKIQSKH--LRPT
Query: ISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQR
+SPEL+Q+R + Y++G +S+ELL+H +VV LS KIK G+ L++ +++LKE+LG EPS QLA SLKIS ELRSRM E LARE L MSN+RLV+SIAQ+
Subjt: ISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQR
Query: YDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV
YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK +L+++GI P+++ IA SLN+S+KKV
Subjt: YDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV
Query: KNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQ
NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++ GLSRERVRQ
Subjt: KNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQ
Query: VGLVALEKLKKAAKTRKMEAML
VGL+A+EKLK AA+ + +EA+L
Subjt: VGLVALEKLKKAAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 4.5e-41 | 33.97 | Show/hide |
Query: EKTLKKVPVTCSGVSARQRRMSSKRKIQS---KHLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLA
EKT +P +G S +++R+ ++ + ++LR T S S +LL+ E LS I+ L LE +T L ER G +P+ Q A
Subjt: EKTLKKVPVTCSGVSARQRRMSSKRKIQS---KHLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLA
Query: ISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTH
+ + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H
Subjt: ISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTH
Query: LHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVN
+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD P T IL + +++
Subjt: LHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVN
Query: KLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLI
K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: KLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLI
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| AT1G64860.1 sigma factor A | 1.3e-194 | 70.55 | Show/hide |
Query: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
MAT A+IGL KRLL+SS Y+SD TEK L ND+ Q ++ TKS + AK ++N+SPS+P SNRH+Q KA+KE V+ S T +PWLPN T E
Subjt: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHLRPTISPELLQNRLKGYVKGLLS
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K H++ +S +++GYVKG++S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHLRPTISPELLQNRLKGYVKGLLS
Query: EELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGL
E++LSH EVVRLSKKIK GL L++HK+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+DLVQGGLIGL
Subjt: EELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGL
Query: LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFP
LRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+SKVFSLDR+AFP
Subjt: LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFP
Query: SLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKME
SLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKLK AA+ RKME
Subjt: SLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKME
Query: AMLIKH
AM++K+
Subjt: AMLIKH
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| AT1G64860.2 sigma factor A | 4.2e-180 | 69.7 | Show/hide |
Query: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
MAT A+IGL KRLL+SS Y+SD TEK L ND+ Q ++ TKS + AK ++N+SPS+P SNRH+Q KA+KE V+ S T +PWLPN T E
Subjt: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHLRPTISPELLQNRLKGYVKGLLS
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K H++ +S +++GYVKG++S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHLRPTISPELLQNRLKGYVKGLLS
Query: EELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGL
E++LSH EVVRLSKKIK GL L++HK+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+DLVQGGLIGL
Subjt: EELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGL
Query: LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFP
LRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+SKVFSLDR+AFP
Subjt: LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFP
Query: SLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
SLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: SLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.0e-36 | 32.59 | Show/hide |
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 1.4e-34 | 33.43 | Show/hide |
Query: SARQRRMSSKRKIQSKHLRP----TISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSR
S ++R+ +R++ + L P E + V G LS E V+L +K G LE T ++E + +++ L R + +
Subjt: SARQRRMSSKRKIQSKHLRP----TISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSR
Query: MMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E +
Subjt: MMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
Query: NAKVKLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREI
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L RE +
Subjt: NAKVKLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREI
Query: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
+ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
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