| GenBank top hits | e value | %identity | Alignment |
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| KAA0047414.1 gag/pol protein [Cucumis melo var. makuwa] | 1.89e-30 | 36.68 | Show/hide |
Query: GMLP-DMFSHGIGLEASSLKEELRRDPKRSKRWPML-QRLENSRPIPPTVSSLCFV--------LVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEAS
G +P F H G E S L+EE R + +RSKRWPML Q + +RP+ T + + S F+ TP+TS + ++P F Q IG EAS
Subjt: GMLP-DMFSHGIGLEASSLKEELRRDPKRSKRWPML-QRLENSRPIPPTVSSLCFV--------LVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEAS
Query: LLEGELR-HGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCVPRKLEREYPRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKL
LE +LR + + + FQRV TR + TTENA ++ RLS G++ REAS LE ELR P+
Subjt: LLEGELR-HGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCVPRKLEREYPRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKL
Query: SKRWPML------RTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQFSRPQLKNSPPT--------ICSLSIFGARALRTSTLILGIVP
SKRWPML G K GN LS TS VRP+K+RARM RTQF +K+ P + S S F RT I GIVP
Subjt: SKRWPML------RTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQFSRPQLKNSPPT--------ICSLSIFGARALRTSTLILGIVP
Query: DKFSEGIALEASLLEGELR
FS+ EASLLEGELR
Subjt: DKFSEGIALEASLLEGELR
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| KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] | 8.42e-84 | 49.24 | Show/hide |
Query: MPWTQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRTLTYTSGMLPDMFSHGIGLEASSLKEELRR----DPKRSKRWPM-----LQRLENSRPI---
MP TQF RP K G T+SSLC VLVISL IF LRT T+T GM+ D F GIG EAS L+ EL K S PM + R + SRP
Subjt: MPWTQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRTLTYTSGMLPDMFSHGIGLEASSLKEELRR----DPKRSKRWPM-----LQRLENSRPI---
Query: -PPTVSSLCFVLVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCVPR
PPTVSSLC VLVI+ SIF ART +TSTH +LPDTFS ETT NAL + + R
Subjt: -PPTVSSLCFVLVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCVPR
Query: KLEREYPRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKLSKRWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQFSR
P F L K PD FF LL REAS LEEEL + K SKRWPM T+GE S GVRNHWKC+CSEGN L+ RTS PKK RARMPR+QFSR
Subjt: KLEREYPRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKLSKRWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQFSR
Query: PQLKNSPPTICSL--------SIFGARALRTSTLILGIVPDKFSEGIALEASLLEGELRCDPKQSQRWPMLPTSGECLSGVRNHWKCTCSEQNRLT
K+ PT+ SL SIF AR RTST G++PD FS GI EAS LEGEL C+PK+S+RW MLPTS E SG+RNH KCT E N L+
Subjt: PQLKNSPPTICSL--------SIFGARALRTSTLILGIVPDKFSEGIALEASLLEGELRCDPKQSQRWPMLPTSGECLSGVRNHWKCTCSEQNRLT
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| KAA0065520.1 retrotransposon protein, putative, Ty3-gypsy subclass, expressed [Cucumis melo var. makuwa] | 3.50e-33 | 33 | Show/hide |
Query: FVLVISLSIFGDHALRTLTYTSGMLPDMFSHGIGLEASSLKEELRRDPKRSKRWPML-QRLENSRP------------------IPPTVSSLCFVLVINP
F I S FG H RTL Y ++P FS IG EASSL+EELR +PK+SKRWPML QR+ N+RP +P V C +
Subjt: FVLVISLSIFGDHALRTLTYTSGMLPDMFSHGIGLEASSLKEELRRDPKRSKRWPML-QRLENSRP------------------IPPTVSSLCFVLVINP
Query: SIFEART--PKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVL--------KTRLVPETTENALAAKETGWARGLRVCVPRKLEREY
FE R P+T + ++P FSQ I L A+ L E F + +T++ PET E A T R + +
Subjt: SIFEART--PKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVL--------KTRLVPETTENALAAKETGWARGLRVCVPRKLEREY
Query: PRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKLSKRWPMLRTSGEHSFGVR-NHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQFSRPQLKN
FL G K ++FF + V R+ + + +L ++ S S G + ++ S+GN LS R S V P+K+R RMP TQF +KN
Subjt: PRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKLSKRWPMLRTSGEHSFGVR-NHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQFSRPQLKN
Query: SPPTIC--------SLSIFGARALRTSTLILGIVPDKFSEGIALEASLLEGELRCDPKQSQRWPML---PTSGECLSGVRNH----WKCT------CSEQ
P + S S F LRTS I GIV FS+ I EAS +GE RC+PK+S+ WP+L + +SG+ H WKC CS Q
Subjt: SPPTIC--------SLSIFGARALRTSTLILGIVPDKFSEGIALEASLLEGELRCDPKQSQRWPML---PTSGECLSGVRNH----WKCT------CSEQ
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| TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa] | 1.74e-54 | 36.18 | Show/hide |
Query: TQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRTLTYTSGMLPDMF-SHGIGLEASSLKEELR-----RDPKRSKRWPMLQRLENSRPIPPTVSSLCF
T FSR KSG TVSSLC VLVISLSIFG RT T++ L +F + G E + +R + S W L + +P+ + +
Subjt: TQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRTLTYTSGMLPDMF-SHGIGLEASSLKEELR-----RDPKRSKRWPMLQRLENSRPIPPTVSSLCF
Query: VLVIN--------------PSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRV
+ + S F + K S L T +G E +RH KT+Q + E L ++ R
Subjt: VLVIN--------------PSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRV
Query: CVPRKLEREYPRLSFLILGYKAVPDDFFPLLFVGREAS--LLEEELRREPKLSKRWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMP
+ P +F G K PD FFPLL +G ++ L+ K +RWPML TSGE S GVRN WKC+C EGN LS RTS RPKK RARMP
Subjt: CVPRKLEREYPRLSFLILGYKAVPDDFFPLLFVGREAS--LLEEELRREPKLSKRWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMP
Query: RTQFSRPQLKNSPPTIC--------SLSIFGARALRTSTLILGIVPDKFSE-------------------------------------------------
+TQFSRP K+ PPT+ SLSIFGA RTST G++PD FSE
Subjt: RTQFSRPQLKNSPPTIC--------SLSIFGARALRTSTLILGIVPDKFSE-------------------------------------------------
Query: -----GIALEASLLEGELRCDPKQSQRWPMLPTSGECLSGVRNHWKCTCSEQNRLT
GI EAS LEGEL CDPK S+RWPMLPT GE SG RNHWKCTCSE N L+
Subjt: -----GIALEASLLEGELRCDPKQSQRWPMLPTSGECLSGVRNHWKCTCSEQNRLT
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| TYK23424.1 gag/pol protein [Cucumis melo var. makuwa] | 1.03e-73 | 41.37 | Show/hide |
Query: PWTQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRTLTYTSGMLPDMFSHGIGLEASSLKEELRRDPKRSKRWPMLQ-RLENSRPIPPTVSSLCF---
P TQFSRP ++ R T+T GML DMF GIG +ASSL+ ELR DPKRSKRWPML+ R E S + S C
Subjt: PWTQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRTLTYTSGMLPDMFSHGIGLEASSLKEELRRDPKRSKRWPMLQ-RLENSRPIPPTVSSLCF---
Query: -----VLVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCVPRKLERE
+ I +ARTP+TSTH +LP+TFSQ IG EASLLEGEL + + + P+ ++ ++ W++ + +
Subjt: -----VLVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCVPRKLERE
Query: YPRLSFLILGYKAVPD-----DFFPLLF---VGREASLLEEELRREPKLSKRWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQ
+S LI G D P +F +GREAS LE ELR +PK KRWPML+TSGE S GVRN+WK +CSE N L RTS+V PKK ARMP+TQ
Subjt: YPRLSFLILGYKAVPD-----DFFPLLF---VGREASLLEEELRREPKLSKRWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQ
Query: FSRPQLKNSPPTICSLSIFGARALRTSTLILGIVPDKFSEGIALEASLLEGELRC--------------------------------DPKQSQRWPMLPT
F RP RT T G++PD FS+GI EAS LEGEL+C DPK S+RWPMLPT
Subjt: FSRPQLKNSPPTICSLSIFGARALRTSTLILGIVPDKFSEGIALEASLLEGELRC--------------------------------DPKQSQRWPMLPT
Query: SGECLSGVRNHWKCTCSEQNRLT
SGE SGVRNHWKCTCSE N L+
Subjt: SGECLSGVRNHWKCTCSEQNRLT
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein | 4.4e-65 | 41.29 | Show/hide |
Query: MPWTQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRT-----------LTYTSGMLPDMFSHGIGLEASSLKE-ELRRDPKRSK-RWPMLQRLENSRP
+PWTQFSRP KSG TVSSLC VLV + + + + T + + + + + + + L R PK+++ R P Q
Subjt: MPWTQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRT-----------LTYTSGMLPDMFSHGIGLEASSLKE-ELRRDPKRSK-RWPMLQRLENSRP
Query: I-PPTVSSLCFVLVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGEL----------RHGKTIQTHGQCFQ----------------------
PPT+SSLC VLVI+ IF ART +TSTH ++ DTF IG EAS LEGEL + ++T + +
Subjt: I-PPTVSSLCFVLVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGEL----------RHGKTIQTHGQCFQ----------------------
Query: ---------RVLKTR-----LVP-----ETTENALAAKETGWARGLRVCVPRKLEREYPRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKLSK
R L+T ++P ETT NAL + + R P F L K PD FF LL REAS LEEEL + K SK
Subjt: ---------RVLKTR-----LVP-----ETTENALAAKETGWARGLRVCVPRKLEREYPRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKLSK
Query: RWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQFSRPQLKNSPPTICS--------LSIFGARALRTSTLILGIVPDKFSEGIA
RWPM T+GE S GVRNHWKC+CSEGN L+ RTS PKK RARMPR+QFSR K+ PT+ S LSIF AR RTST G++PD FS GI
Subjt: RWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQFSRPQLKNSPPTICS--------LSIFGARALRTSTLILGIVPDKFSEGIA
Query: LEASLLEGELRCDPKQSQRWPMLPTSGECLSGVRNHWKCTCSEQNRLT
EAS LEGEL C+PK+S+RW MLPTS E SG+RNH KCT E N L+
Subjt: LEASLLEGELRCDPKQSQRWPMLPTSGECLSGVRNHWKCTCSEQNRLT
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| A0A5A7VEB1 Retrotransposon protein, putative, Ty3-gypsy subclass, expressed | 4.2e-31 | 33 | Show/hide |
Query: FVLVISLSIFGDHALRTLTYTSGMLPDMFSHGIGLEASSLKEELRRDPKRSKRWPML-QRLENSRP------------------IPPTVSSLCFVLVINP
F I S FG H RTL Y ++P FS IG EASSL+EELR +PK+SKRWPML QR+ N+RP +P V C +
Subjt: FVLVISLSIFGDHALRTLTYTSGMLPDMFSHGIGLEASSLKEELRRDPKRSKRWPML-QRLENSRP------------------IPPTVSSLCFVLVINP
Query: SIFEART--PKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVL--------KTRLVPETTENALAAKETGWARGLRVCVPRKLEREY
FE R P+T + ++P FSQ I L A+ L E F + +T++ PET E A T R + +
Subjt: SIFEART--PKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVL--------KTRLVPETTENALAAKETGWARGLRVCVPRKLEREY
Query: PRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKLSKRWPMLRTSGEHSFG-VRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQFSRPQLKN
FL G K ++FF + V R+ + + +L ++ S S G + ++ S+GN LS R S V P+K+R RMP TQF +KN
Subjt: PRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKLSKRWPMLRTSGEHSFG-VRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQFSRPQLKN
Query: SPP--------TICSLSIFGARALRTSTLILGIVPDKFSEGIALEASLLEGELRCDPKQSQRWPML---PTSGECLSGVRNH----WKCT------CSEQ
P + S S F LRTS I GIV FS+ I EAS +GE RC+PK+S+ WP+L + +SG+ H WKC CS Q
Subjt: SPP--------TICSLSIFGARALRTSTLILGIVPDKFSEGIALEASLLEGELRCDPKQSQRWPML---PTSGECLSGVRNH----WKCT------CSEQ
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| A0A5D3CV18 Gag/pol protein | 3.3e-28 | 36.62 | Show/hide |
Query: GMLP-DMFSHGIGLEASSLKEELRRDPKRSKRWPML-QRLENSRPIPPTVSSLCF--------VLVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEAS
G +P F H G E S L+EE R + +RSKRWPML Q + +RP+ T + + S F+ TP+TS + ++P F Q IG EAS
Subjt: GMLP-DMFSHGIGLEASSLKEELRRDPKRSKRWPML-QRLENSRPIPPTVSSLCF--------VLVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEAS
Query: LLEGELR-HGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCVPRKLEREYPRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKL
LE +LR + + + FQRV TR + TTENA ++ RLS G++ REAS LE ELR P+
Subjt: LLEGELR-HGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCVPRKLEREYPRLSFLILGYKAVPDDFFPLLFVGREASLLEEELRREPKL
Query: SKRWPMLRTSGEHSFGVRNHWKCSCS-EGNVLSLRTSDVRPKKMRARMPRTQFSRPQLKNSPP--------TICSLSIFGARALRTSTLILGIVPDKFSE
SKRWPML ++ +GN LS TS VRP+K+RARM RTQF +K+ P + S S F RT I GIVP FS+
Subjt: SKRWPMLRTSGEHSFGVRNHWKCSCS-EGNVLSLRTSDVRPKKMRARMPRTQFSRPQLKNSPP--------TICSLSIFGARALRTSTLILGIVPDKFSE
Query: GIALEASLLEGELR
EASLLEGELR
Subjt: GIALEASLLEGELR
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| A0A5D3DFP2 Uncharacterized protein | 2.2e-48 | 37 | Show/hide |
Query: TQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRTLTYTSGMLPDMF-SHGIGLEASSLKEELR-----RDPKRSKRW-------PMLQRLENSRPIPP
T FSR KSG TVSSLC VLVISLSIFG RT T++ L +F + G E + +R + S W L+R + R
Subjt: TQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRTLTYTSGMLPDMF-SHGIGLEASSLKEELR-----RDPKRSKRW-------PMLQRLENSRPIPP
Query: TVSSLCFVLV-----INPSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCV
C S F + K S L T +G E +RH KT+Q + E L ++ R
Subjt: TVSSLCFVLV-----INPSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCV
Query: PRKLEREYPRLSFLILGYKAVPDDFFPLLFVGRE--ASLLEEELRREPKLSKRWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRT
+ P +F G K PD FFPLL +G + + L+ K +RWPML TSGE S GVRN WKC+C EGN LS RTS RPKK RARMP+T
Subjt: PRKLEREYPRLSFLILGYKAVPDDFFPLLFVGRE--ASLLEEELRREPKLSKRWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRT
Query: QFSRPQLKNSPPTIC--------SLSIFGARALRTST--------------------LIL----------------------------------GIVPDK
QFSRP K+ PPT+ SLSIFGA RTST L+L G++PD
Subjt: QFSRPQLKNSPPTIC--------SLSIFGARALRTST--------------------LIL----------------------------------GIVPDK
Query: FSEGIALEASLLEGELRCDPKQSQRWPMLPTSGECLSGVRNHWKCTCSEQNRLT
FS GI EAS LEGEL CDPK S+RWPMLPT GE SG RNHWKCTCSE N L+
Subjt: FSEGIALEASLLEGELRCDPKQSQRWPMLPTSGECLSGVRNHWKCTCSEQNRLT
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| A0A5D3DIF8 Gag/pol protein | 3.8e-64 | 41.37 | Show/hide |
Query: PWTQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRTLTYTSGMLPDMFSHGIGLEASSLKEELRRDPKRSKRWPMLQ-RLENSRPIPPTVSSLC----
P TQFSRP ++ R T+T GML DMF GIG +ASSL+ ELR DPKRSKRWPML+ R E S + S C
Subjt: PWTQFSRPRIKSGLLTVSSLCFVLVISLSIFGDHALRTLTYTSGMLPDMFSHGIGLEASSLKEELRRDPKRSKRWPMLQ-RLENSRPIPPTVSSLC----
Query: ----FVLVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCVPRKLERE
+ I +ARTP+TSTH +LP+TFSQ IG EASLLEGEL + + + + P+ ++ ++ W++ + +
Subjt: ----FVLVINPSIFEARTPKTSTHALCVLPDTFSQDIGLEASLLEGELRHGKTIQTHGQCFQRVLKTRLVPETTENALAAKETGWARGLRVCVPRKLERE
Query: YPRLSFLILGYKAVPD-----DFFPLLF---VGREASLLEEELRREPKLSKRWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQ
+S LI G D P +F +GREAS LE ELR +PK KRWPML+TSGE S GVRN+WK +CSE N L RTS+V PKK ARMP+TQ
Subjt: YPRLSFLILGYKAVPD-----DFFPLLF---VGREASLLEEELRREPKLSKRWPMLRTSGEHSFGVRNHWKCSCSEGNVLSLRTSDVRPKKMRARMPRTQ
Query: FSRPQLKNSPPTICSLSIFGARALRTSTLILGIVPDKFSEGIALEASLLEGELRC--------------------------------DPKQSQRWPMLPT
F RP RT T G++PD FS+GI EAS LEGEL+C DPK S+RWPMLPT
Subjt: FSRPQLKNSPPTICSLSIFGARALRTSTLILGIVPDKFSEGIALEASLLEGELRC--------------------------------DPKQSQRWPMLPT
Query: SGECLSGVRNHWKCTCSEQNRLT
SGE SGVRNHWKCTCSE N L+
Subjt: SGECLSGVRNHWKCTCSEQNRLT
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