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IVF0011859 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011859
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSenescence-specific cysteine protease sag39
Genome locationchr04:4431940..4432334
RNA-Seq ExpressionIVF0011859
SyntenyIVF0011859
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060734.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.72e-5080.34Show/hide
Query:  MTKNHAGKTSSRIFSARHDNNLHP--------------DSSHVIQSTRKHAAKRSSRILSTYHGNNIPLLCAHRATQPWVKLGPKPYHNPPSTSSTRLRF
        MTKNHA KTSSRIFS RH NNLHP              DSSHVIQSTRKHAAKRSS IL+TYHGNNIPLLCAHRATQPW+KLGPKPYHNP STSS RL+F
Subjt:  MTKNHAGKTSSRIFSARHDNNLHP--------------DSSHVIQSTRKHAAKRSSRILSTYHGNNIPLLCAHRATQPWVKLGPKPYHNPPSTSSTRLRF

Query:  SDLRSRPLSATESPDNR
        SDLRSRPLSATESPDNR
Subjt:  SDLRSRPLSATESPDNR
TYK09013.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]2.13e-3889.47Show/hide
Query:  VIQSTRKHAAKRSSRILSTYHGNNIPLLCAHRATQPWVKLGPKPYHNPPSTSSTRLRFSDLRSRPLSATESPDNRR
        +IQSTRK AAK SSRILSTYHG+NIPLLCAHRATQPWVKLGPKPY+NPPSTSS RLRFSDLRS P SATESPDNRR
Subjt:  VIQSTRKHAAKRSSRILSTYHGNNIPLLCAHRATQPWVKLGPKPYHNPPSTSSTRLRFSDLRSRPLSATESPDNRR
TrEMBL top hitse value%identityAlignment
A0A5A7V094 Reverse transcriptase6.0e-4280.34Show/hide
Query:  MTKNHAGKTSSRIFSARHDNNLHP--------------DSSHVIQSTRKHAAKRSSRILSTYHGNNIPLLCAHRATQPWVKLGPKPYHNPPSTSSTRLRF
        MTKNHA KTSSRIFS RH NNLHP              DSSHVIQSTRKHAAKRSS IL+TYHGNNIPLLCAHRATQPW+KLGPKPYHNP STSS RL+F
Subjt:  MTKNHAGKTSSRIFSARHDNNLHP--------------DSSHVIQSTRKHAAKRSSRILSTYHGNNIPLLCAHRATQPWVKLGPKPYHNPPSTSSTRLRF

Query:  SDLRSRPLSATESPDNR
        SDLRSRPLSATESPDNR
Subjt:  SDLRSRPLSATESPDNR
A0A5D3CAY3 Senescence-specific cysteine protease sag391.2e-2989.47Show/hide
Query:  VIQSTRKHAAKRSSRILSTYHGNNIPLLCAHRATQPWVKLGPKPYHNPPSTSSTRLRFSDLRSRPLSATESPDNRR
        +IQSTRK AAK SSRILSTYHG+NIPLLCAHRATQPWVKLGPKPY+NPPSTSS RLRFSDLRS P SATESPDNRR
Subjt:  VIQSTRKHAAKRSSRILSTYHGNNIPLLCAHRATQPWVKLGPKPYHNPPSTSSTRLRFSDLRSRPLSATESPDNRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAAAATCATGCAGGCAAAACTAGCTCACGCATATTTAGTGCCCGCCACGACAACAACCTCCATCCAGATAGCTCACACGTGATCCAATCCACAAGGAAACACGC
GGCCAAAAGGAGCTCACGCATACTTAGCACCTACCACGGTAACAACATACCACTCCTATGTGCACATAGAGCCACCCAACCATGGGTTAAGCTAGGCCCGAAGCCATATC
ACAATCCTCCATCCACGTCCTCAACTAGGCTTAGGTTCTCGGATCTCCGGTCACGGCCTCTTTCAGCCACGGAATCCCCTGACAACCGTAGGTGGCGCTACAGAAACACA
TTCTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAAAAATCATGCAGGCAAAACTAGCTCACGCATATTTAGTGCCCGCCACGACAACAACCTCCATCCAGATAGCTCACACGTGATCCAATCCACAAGGAAACACGC
GGCCAAAAGGAGCTCACGCATACTTAGCACCTACCACGGTAACAACATACCACTCCTATGTGCACATAGAGCCACCCAACCATGGGTTAAGCTAGGCCCGAAGCCATATC
ACAATCCTCCATCCACGTCCTCAACTAGGCTTAGGTTCTCGGATCTCCGGTCACGGCCTCTTTCAGCCACGGAATCCCCTGACAACCGTAGGTGGCGCTACAGAAACACA
TTCTCGTAG
Protein sequenceShow/hide protein sequence
MTKNHAGKTSSRIFSARHDNNLHPDSSHVIQSTRKHAAKRSSRILSTYHGNNIPLLCAHRATQPWVKLGPKPYHNPPSTSSTRLRFSDLRSRPLSATESPDNRRWRYRNT
FS