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IVF0011860 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011860
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:27832859..27833188
RNA-Seq ExpressionIVF0011860
SyntenyIVF0011860
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646596.1 hypothetical protein Csa_004903, partial [Cucumis sativus]3.00e-5274.07Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLT F+PLLD+TS+ AQ S D+AD+KF P K F+I  +RSPRF ATLQLSP+WF+++SVDH HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQ+
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPS
         LRFDTPS
Subjt:  FLRFDTPS

TYK02994.1 uncharacterized protein E5676_scaffold46G00830 [Cucumis melo var. makuwa]2.52e-71100Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSS
        FLRFDTPSS
Subjt:  FLRFDTPSS

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]6.57e-5175.23Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKL  F+PLLD+TS+LAQ S DNAD+KF P K F+I  +RSPRF ATLQLSP+WF+ +SVD+ HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSS
         LRFDTPSS
Subjt:  FLRFDTPSS

XP_031743957.1 uncharacterized protein LOC116404737 [Cucumis sativus]7.40e-5985.32Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLTEFEPLLDST +LA YSN+NA +KF PGKLFLIV NR P F ATLQLSPRWF+N+SVDHVHSSKVSLESFHDAMLDGG+FS+MSIHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSS
         LRFDTPSS
Subjt:  FLRFDTPSS

XP_031743987.1 uncharacterized protein LOC116404759 [Cucumis sativus]3.17e-5174.31Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLT F+PLLD+TS+ AQ S D+AD+KF P K F+I  +RSPRF ATLQLSP+WF+++SVDH HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQ+
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSS
         LRFDTPSS
Subjt:  FLRFDTPSS

TrEMBL top hitse value%identityAlignment
A0A0A0K902 Uncharacterized protein1.6e-3974.31Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLT F+PLLD+TS+ AQ S D+AD+KF P K F+I  +RSPRF ATLQLSP+WF+++SVDH HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQ+
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSS
         LRFDTPSS
Subjt:  FLRFDTPSS

A0A0A0K9W4 Uncharacterized protein1.1e-4585.32Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLTEFEPLLDST +LA YSN+NA +KF PGKLFLIV NR P F ATLQLSPRWF+N+SVDHVHSSKVSLESFHDAMLDGG+FS+MSIHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSS
         LRFDTPSS
Subjt:  FLRFDTPSS

A0A1S3CL88 uncharacterized protein LOC1035022501.6e-3975.23Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKL  F+PLLD+TS+LAQ S DNAD+KF P K F+I  +RSPRF ATLQLSP+WF+ +SVD+ HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSS
         LRFDTPSS
Subjt:  FLRFDTPSS

A0A5D3BV00 Uncharacterized protein7.9e-55100Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSS
        FLRFDTPSS
Subjt:  FLRFDTPSS

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein1.6e-3975.23Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKL  F+PLLD+TS+LAQ S DNAD+KF P K F+I  +RSPRF ATLQLSP+WF+ +SVD+ HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSS
         LRFDTPSS
Subjt:  FLRFDTPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTCAAGCTTACAGAATTTGAGCCTCTTCTTGACTCAACCTCCTATCTTGCTCAATATTCGAACGACAATGCCGACATAAAATTCGCACCTGGGAAGCTCTT
CCTAATCGTCCCGAACCGTTCCCCTCGCTTCTTTGCAACGCTACAATTGTCGCCAAGATGGTTCTCCAACTATTCCGTCGATCATGTTCATAGTTCCAAGGTTTCCCTTG
AATCCTTCCATGATGCTATGTTGGATGGTGGAGATTTTTCTTCAATGTCAATCCATCTTTTGGACAAAACAAACCAAATGTTTCTTAGATTTGATACTCCTTCGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTCAAGCTTACAGAATTTGAGCCTCTTCTTGACTCAACCTCCTATCTTGCTCAATATTCGAACGACAATGCCGACATAAAATTCGCACCTGGGAAGCTCTT
CCTAATCGTCCCGAACCGTTCCCCTCGCTTCTTTGCAACGCTACAATTGTCGCCAAGATGGTTCTCCAACTATTCCGTCGATCATGTTCATAGTTCCAAGGTTTCCCTTG
AATCCTTCCATGATGCTATGTTGGATGGTGGAGATTTTTCTTCAATGTCAATCCATCTTTTGGACAAAACAAACCAAATGTTTCTTAGATTTGATACTCCTTCGAGTTAG
Protein sequenceShow/hide protein sequence
MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQMFLRFDTPSS