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IVF0011926 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011926
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr03:15176786..15176989
RNA-Seq ExpressionIVF0011926
SyntenyIVF0011926
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031930.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.83e-0571.43Show/hide
Query:  CP--HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        CP  +VDA   T DAA  RQRRPMA RARGTQKKDGR RL L
Subjt:  CP--HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL

KAA0052783.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.20e-0450Show/hide
Query:  HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL---------WLPVGEV
        ++D   +T D   PRQRRPMAGRA  TQKKDGR R+ L         WL  GE+
Subjt:  HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL---------WLPVGEV

KAA0066232.1 transposase [Cucumis melo var. makuwa]2.10e-1191.18Show/hide
Query:  MACPHVDAGMVTADAAPPRQRRPMAGRARGTQKK
        MACP+VDAGM TADAAPPRQRRPMAGRARGT+KK
Subjt:  MACPHVDAGMVTADAAPPRQRRPMAGRARGTQKK

KAA0067956.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]6.71e-1279.55Show/hide
Query:  MACP--HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        MACP  +VDA   TADA PPRQ+RPMAGRARGTQKK+GRGRLSL
Subjt:  MACP--HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL

TYK17960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.22e-0673.68Show/hide
Query:  HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        +VDA   T D   PRQRRPMAGRARGTQKKDGR RL L
Subjt:  HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL

TrEMBL top hitse value%identityAlignment
A0A5A7VD11 Transposase5.8e-0891.18Show/hide
Query:  MACPHVDAGMVTADAAPPRQRRPMAGRARGTQKK
        MACP+VDAGM TADAAPPRQRRPMAGRARGT+KK
Subjt:  MACPHVDAGMVTADAAPPRQRRPMAGRARGTQKK

A0A5A7VN13 NBS-LRR type resistance protein2.0e-0879.55Show/hide
Query:  MACP--HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        MACP  +VDA   TADA PPRQ+RPMAGRARGTQKK+GRGRLSL
Subjt:  MACP--HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL

A0A5D3D2P4 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-0473.68Show/hide
Query:  HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        +VDA   T D   PRQRRPMAGRARGTQKKDGR RL L
Subjt:  HVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGCCCTCACGTCGATGCTGGTATGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCG
TGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAGAAACGGCGGTCGTCGGAGGCGCACGGACGGAAGGAGAAAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGCCCTCACGTCGATGCTGGTATGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCG
TGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAGAAACGGCGGTCGTCGGAGGCGCACGGACGGAAGGAGAAAAGAATGA
Protein sequenceShow/hide protein sequence
MACPHVDAGMVTADAAPPRQRRPMAGRARGTQKKDGRGRLSLWLPVGEVRMERNGGRRRRTDGRRKE