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IVF0011927 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011927
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosomal protein S1
Genome locationtig00007088:989468..990004
RNA-Seq ExpressionIVF0011927
SyntenyIVF0011927
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEN56125.1 ribosomal protein S1 [Cucumis melo subsp. melo]5.84e-124100Show/hide
Query:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
        MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
Subjt:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR

Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
        QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL

XP_022974554.1 uncharacterized protein LOC111473236 [Cucurbita maxima]1.49e-9588.82Show/hide
Query:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
        MFLVDAGPG TP ICMQDEPTGVPINRA R E  V  GSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAAR ND LVGSTDVVAGEPLFLLPRRFR
Subjt:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR

Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV
        QNRAWMELNKIWQ N KVKG IIEKVKGGYSVAIAGFITFLPF PLI QRISN+RF+I+SI+PKRTNIVV
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV

YP_003587379.2 ribosomal protein S1 [Cucurbita pepo]5.59e-9387.06Show/hide
Query:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
        MFLVDAGPG TP ICMQDEPTGVPINRAAR E  V  G LDLVAGESLIKEPILERFFIDLVAGESLIKERAAA  ND LVGSTDVVAGEPLF+LPRRFR
Subjt:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR

Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV
        QNRAWMELNKIWQ N KVKG IIEKVKGGYSVAIAGFITFLPF PLI QRISN+RF+I+SI+PK TNIVV
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV

YP_004849347.1 ribosomal protein S1 [Cucumis sativus]1.23e-10391.23Show/hide
Query:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
        MFLVDAGPG TPIICMQDEPTGVPINRAAR ETH AVGSLDLVAGESL+KE ILERFFIDLVAGESL+KERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
Subjt:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR

Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFC-PLIRQRISNDRFSIQSIHPKRTNIVV
        QNRAWMELNKIWQ NQKVKG IIEKVKGGYSVAIAGFITFLPF  PLIRQRISNDRF+I+SI+PKRTNI++
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFC-PLIRQRISNDRFSIQSIHPKRTNIVV

YP_009706796.1 ribosomal protein S1 [Ilex pubescens]2.02e-9387.65Show/hide
Query:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
        MFLVDAGPG TP ICMQDEPTGVPINRA R E  V  GSLDLVAGESLIKE ILERFFIDLVAGESLIKERAAAR ND LVGSTDVVAGEPL LLPRRFR
Subjt:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR

Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV
        QNRAWMELNKIW+ N KVKG IIEKVKGGYSVAIAGFITFLPF PLI QRISNDRF+I+SI+PKRTNIVV
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV

TrEMBL top hitse value%identityAlignment
A0A3S9JIJ3 Ribosomal protein S14.4e-95100Show/hide
Query:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
        MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
Subjt:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR

Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
        QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL

A0A5A7V9I0 Ribosomal protein S1 (Mitochondrion)4.4e-95100Show/hide
Query:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
        MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
Subjt:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR

Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
        QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL

A0A6J1IHY3 uncharacterized protein LOC1114732361.2e-7388.82Show/hide
Query:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
        MFLVDAGP GTP ICMQDEPTGVPINRA R E    VGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAAR ND LVGSTDVVAGEPLFLLPRRFR
Subjt:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR

Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV
        QNRAWMELNKIWQ N KVKG IIEKVKGGYSVAIAGFITFLPF PLI QRISN+RF+I+SI+PKRTNIVV
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVV

G3EIZ9 Ribosomal protein S11.5e-7991.23Show/hide
Query:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
        MFLVDAGP GTPIICMQDEPTGVPINRAAR ETH AVGSLDLVAGESL+KE ILERFFIDLVAGESL+KERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
Subjt:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR

Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPF-CPLIRQRISNDRFSIQSIHPKRTNIVV
        QNRAWMELNKIWQ NQKVKG IIEKVKGGYSVAIAGFITFLPF  PLIRQRISNDRF+I+SI+PKRTNI++
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPF-CPLIRQRISNDRFSIQSIHPKRTNIVV

G3EU09 Ribosomal protein S14.4e-95100Show/hide
Query:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
        MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR
Subjt:  MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFR

Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
        QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL

SwissProt top hitse value%identityAlignment
P26863 Ribosomal protein S1, mitochondrial4.0e-1346Show/hide
Query:  GSTDV-VAGEPLFLLPR----RFRQNRAWMELNKIWQRNQK-VKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDR---FSIQSIHPKRTNIVVKK
        G  DV V GEP  LLP+    + ++   W+EL KIW+ +Q  VKG I+  VKGGY+VAIAG+I FLP   L  +++   +   FSI ++ PK +NIVVK+
Subjt:  GSTDV-VAGEPLFLLPR----RFRQNRAWMELNKIWQRNQK-VKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDR---FSIQSIHPKRTNIVVKK

P37985 30S ribosomal protein S17.6e-0431.25Show/hide
Query:  GEPLFLLPRRFRQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISND---------RFSIQSIHPKRTNIVVKKETL
        GE L L   + +++ AW+ L K ++ +  V G+I  KVKGG++V + G   FLP   L+  R   D          F +  +  KR N+VV +  +
Subjt:  GEPLFLLPRRFRQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISND---------RFSIQSIHPKRTNIVVKKETL

Q48082 30S ribosomal protein S19.9e-0430.95Show/hide
Query:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISND---------RFSIQSIHPKRTNIVVKKETL
        ++ +W+EL K ++    V GLI  KVKGG++V + G   FLP   L+  R + +          F +  +  KR N+VV +  +
Subjt:  QNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISND---------RFSIQSIHPKRTNIVVKKETL

Q6NDP1 30S ribosomal protein S11.8e-0533.33Show/hide
Query:  RQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLP-----------FCPLIRQRISNDRFSIQSIHPKRTNIVVKKETL
        R+  +W +L K +Q N+KV G+I  +VKGG++V + G + FLP             PL+    ++  F I  +  +R NIVV + T+
Subjt:  RQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLP-----------FCPLIRQRISNDRFSIQSIHPKRTNIVVKKETL

Q83E09 30S ribosomal protein S11.2e-0433.33Show/hide
Query:  RQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLP-----FCPLIRQRISNDR---FSIQSIHPKRTNIVVKKETL
        R+ +AW EL K ++  + VKG+IIE+VKGG++V +     FLP       P+       D+   F I  +  +R N+VV +  +
Subjt:  RQNRAWMELNKIWQRNQKVKGLIIEKVKGGYSVAIAGFITFLP-----FCPLIRQRISNDR---FSIQSIHPKRTNIVVKKETL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTGGATGCAGGACCTGGTGGGACCCCCATCATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGGTTGAGACCCACGTAGCGGT
GGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCCAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCG
CCAGGTTGAATGATTATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCCCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAG
ATTTGGCAAAGGAATCAAAAAGTCAAAGGCTTGATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCTGTCCTCTCAT
AAGGCAAAGGATATCGAATGATCGATTCAGCATTCAGAGCATTCACCCCAAAAGAACGAATATTGTGGTGAAAAAAGAAACTTTGCCTGACCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTGGATGCAGGACCTGGTGGGACCCCCATCATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGGTTGAGACCCACGTAGCGGT
GGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCCAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCG
CCAGGTTGAATGATTATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCCCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAG
ATTTGGCAAAGGAATCAAAAAGTCAAAGGCTTGATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCTGTCCTCTCAT
AAGGCAAAGGATATCGAATGATCGATTCAGCATTCAGAGCATTCACCCCAAAAGAACGAATATTGTGGTGAAAAAAGAAACTTTGCCTGACCTATGA
Protein sequenceShow/hide protein sequence
MFLVDAGPGGTPIICMQDEPTGVPINRAARVETHVAVGSLDLVAGESLIKEPILERFFIDLVAGESLIKERAAARLNDYLVGSTDVVAGEPLFLLPRRFRQNRAWMELNK
IWQRNQKVKGLIIEKVKGGYSVAIAGFITFLPFCPLIRQRISNDRFSIQSIHPKRTNIVVKKETLPDL