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IVF0011942 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011942
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag protease polyprotein
Genome locationchr03:6009613..6009855
RNA-Seq ExpressionIVF0011942
SyntenyIVF0011942
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045023.1 hypothetical protein E6C27_scaffold30G00080 [Cucumis melo var. makuwa]4.00e-0953.73Show/hide
Query:  ENVRGRRGRVCL--EGVKYGRVCLECVGEHNDNSG------GEHNGNDEHNGGDKHNDGSDGYLEKK
        ENV GR  R  L    ++  ++CLE VGEHNDN G      G+H G DEH  GDKHN GSDGY +KK
Subjt:  ENVRGRRGRVCL--EGVKYGRVCLECVGEHNDNSG------GEHNGNDEHNGGDKHNDGSDGYLEKK

KAA0045185.1 hypothetical protein E6C27_scaffold30G001860 [Cucumis melo var. makuwa]1.34e-1253.33Show/hide
Query:  GENVRGRRGRVCLEGVKYGRVCLEC-------VGEHNDNSGGEHNGNDEHNGGDKHNDGSDGYLEKKGVIDIRRR
        GENVRGR GR+CLEG      C  C       V EHN+N GG+  G  +HN G+KHN GSDGY EKK  + I+RR
Subjt:  GENVRGRRGRVCLEGVKYGRVCLEC-------VGEHNDNSGGEHNGNDEHNGGDKHNDGSDGYLEKKGVIDIRRR

KAA0059740.1 auxin response factor 11-like [Cucumis melo var. makuwa]9.32e-0571.88Show/hide
Query:  VGVTLIVSGENVRGRRGRVCLEGVKYGRVCLE
        VG TLIV GENVR R GRVCLEG K  R+C E
Subjt:  VGVTLIVSGENVRGRRGRVCLEGVKYGRVCLE

TYK20954.1 putative tRNA N6-adenosine threonylcarbamoyltransferase [Cucumis melo var. makuwa]4.70e-0560.47Show/hide
Query:  VGEHNDNSG------GEHNGNDEHNGGDKHNDGSDGYLEKKGV
        VGE N+N G      GEHNG+ +HN GDKHN GSDGY EKK +
Subjt:  VGEHNDNSG------GEHNGNDEHNGGDKHNDGSDGYLEKKGV

TYK21914.1 gag protease polyprotein [Cucumis melo var. makuwa]1.47e-0758.33Show/hide
Query:  TLIVS--GENVRGR-------RGRVCLEGVKYGRVCLECVGEHNDNSGGEHNGNDEHNGG
        T ++S  GENVR R       R RVCL+G K  RV LE VGEHNDN G EHNG  +HNGG
Subjt:  TLIVS--GENVRGR-------RGRVCLEGVKYGRVCLECVGEHNDNSGGEHNGNDEHNGG

TrEMBL top hitse value%identityAlignment
A0A5A7TND1 Uncharacterized protein3.2e-0553.73Show/hide
Query:  ENVRGRRGRVCL--EGVKYGRVCLECVGEHND------NSGGEHNGNDEHNGGDKHNDGSDGYLEKK
        ENV GR  R  L    ++  ++CLE VGEHND      N GG+H G DEH  GDKHN GSDGY +KK
Subjt:  ENVRGRRGRVCL--EGVKYGRVCLECVGEHND------NSGGEHNGNDEHNGGDKHNDGSDGYLEKK

A0A5A7TUY0 Uncharacterized protein8.2e-0953.33Show/hide
Query:  GENVRGRRGRVCLEGVKYGRVCLEC-------VGEHNDNSGGEHNGNDEHNGGDKHNDGSDGYLEKKGVIDIRRR
        GENVRGR GR+CLEG      C  C       V EHN+N GG+  G  +HN G+KHN GSDGY EKK  + I+RR
Subjt:  GENVRGRRGRVCLEGVKYGRVCLEC-------VGEHNDNSGGEHNGNDEHNGGDKHNDGSDGYLEKKGVIDIRRR

A0A5D3DE95 Gag protease polyprotein4.2e-0557.38Show/hide
Query:  TLIVS--GENVRGR-------RGRVCLEGVKYGRVCLECVGEHNDNSGGEHNGNDEHNGGD
        T ++S  GENVR R       R RVCL+G K  RV LE VGEHNDN G EHNG  +HNGG+
Subjt:  TLIVS--GENVRGR-------RGRVCLEGVKYGRVCLECVGEHNDNSGGEHNGNDEHNGGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAAGGTAGGAGTGACTTTAATAGTCTCGGGTGAGAATGTGAGAGGGAGACGTGGGCGAGTTTGTTTAGAAGGAGTGAAATATGGGCGAGTTTGTTTAGAATGTGT
GGGGGAGCACAACGACAATAGTGGCGGCGAGCACAATGGCAACGATGAGCACAATGGTGGCGACAAGCATAATGATGGTAGCGATGGTTATTTAGAGAAAAAAGGGGTGA
TAGATATTCGGAGAAGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAAGGTAGGAGTGACTTTAATAGTCTCGGGTGAGAATGTGAGAGGGAGACGTGGGCGAGTTTGTTTAGAAGGAGTGAAATATGGGCGAGTTTGTTTAGAATGTGT
GGGGGAGCACAACGACAATAGTGGCGGCGAGCACAATGGCAACGATGAGCACAATGGTGGCGACAAGCATAATGATGGTAGCGATGGTTATTTAGAGAAAAAAGGGGTGA
TAGATATTCGGAGAAGAAAGTGA
Protein sequenceShow/hide protein sequence
MLKVGVTLIVSGENVRGRRGRVCLEGVKYGRVCLECVGEHNDNSGGEHNGNDEHNGGDKHNDGSDGYLEKKGVIDIRRRK