; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011962 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011962
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptiontRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Genome locationchr03:25514252..25515294
RNA-Seq ExpressionIVF0011962
SyntenyIVF0011962
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065217.1 uncharacterized protein E6C27_scaffold82G005550 [Cucumis melo var. makuwa]2.73e-162100Show/hide
Query:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD
        MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD
Subjt:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD

Query:  SSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEI
        SSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEI
Subjt:  SSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEI

Query:  RWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
        RWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  RWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG

KAG6585580.1 hypothetical protein SDJN03_18313, partial [Cucurbita argyrosperma subsp. sororia]7.45e-7755.83Show/hide
Query:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEP-
        MVLNGFDSVKA   IS+ N  RRRKLKWLFEF +FLFLV +RSS FSLAGP   HFF+RIL VLNSH FVF+VFHAMLFVVYSLSHLTDN SGSNRT+  
Subjt:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEP-

Query:  -------------DSSESLVAP-------------------------PVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLN
                     DS ESL+A                          PVD SV EK+TE+ PV +DSI                  T    P SPV HL 
Subjt:  -------------DSSESLVAP-------------------------PVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLN

Query:  AEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVS
               IIPE ++YRRTESERFEENR+++K RRSKTEIR R  + E T   D V+EMDIDDFNR VE FIAEQK+HIGGR+S
Subjt:  AEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVS

KAG7020495.1 hypothetical protein SDJN02_17180, partial [Cucurbita argyrosperma subsp. argyrosperma]1.13e-7656.54Show/hide
Query:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEP-
        MVLNGFDSVKA   IS+ N  RRRKLKWLFEF +FLFLV +RSS FSLAGP   HFF+RIL VLNSH FVF++FHAMLFVVYSLSH TDN SGSNRT+  
Subjt:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEP-

Query:  -------------DSSESLVAP-------------------------PVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLN
                     DS ESL+A                          PVD SV EK+TE+ PV +DSI     + TT    TA        P SPV HL 
Subjt:  -------------DSSESLVAP-------------------------PVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLN

Query:  AEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVS
               IIPE ++YRRTESERFEENRE++K RRSKTEIR R  + E T   D V+EMDIDDFNR VE FIAEQK+HIGGR+S
Subjt:  AEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVS

XP_011650191.1 uncharacterized protein LOC105434756 [Cucumis sativus]2.51e-14289.8Show/hide
Query:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD
        MVLNGFDSVKALK ISIGNY RR KLKWLFEFFVFLFLVSNRSSFFSLAGPILH FFQRIL VLNSHIFVFMVFHAMLF+VYSLSHLTDNKSGSN TEPD
Subjt:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD

Query:  SSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEI
        SSESLVAPPVDVSVEEKSTEEMPVI+DSIAE PAEETTE+VITA DDTAVL PS PV+HLNA MEAAEII E KRYRRTESERFEEN+EK KFRR KTEI
Subjt:  SSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEI

Query:  RWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
        RWR +  ELTGFV+LVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  RWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG

XP_023002474.1 uncharacterized protein LOC111496300 [Cucurbita maxima]9.90e-7757.46Show/hide
Query:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD
        MVLNGFDSVKA   IS+ N  RRRKLKWLFEF +FLFLV +RSS FSLAGP   HFF+RIL VLNSH FVF+VFHAMLFVVYSLSHLTDN SGSNRTE +
Subjt:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD

Query:  SS--------------ESLVAPPVD-----VSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDD-----TAVLPPSSPVRHLNAEMEAAEIIPEEKRY
        SS              ES++A   D     + V++K+T  +  +   + ++ AE+ TE    + D      T    P SPV HL        IIPE ++Y
Subjt:  SS--------------ESLVAPPVD-----VSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDD-----TAVLPPSSPVRHLNAEMEAAEIIPEEKRY

Query:  RRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVS
        RRTESERFE+NREK+K RRSKTEIR R  + E     D V+EMDIDDFNR VESFIAEQK+HIGGR+S
Subjt:  RRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVS

TrEMBL top hitse value%identityAlignment
A0A0A0LNN4 Uncharacterized protein8.6e-11089.8Show/hide
Query:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD
        MVLNGFDSVKALK ISIGNY RR KLKWLFEFFVFLFLVSNRSSFFSLAGPILH FFQRIL VLNSHIFVFMVFHAMLF+VYSLSHLTDNKSGSN TEPD
Subjt:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD

Query:  SSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEI
        SSESLVAPPVDVSVEEKSTEEMPVI+DSIAE PAEETTE+VITA DDTAVL PS PV+HLNA MEAAEII E KRYRRTESERFEEN+EK KFRR KTEI
Subjt:  SSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEI

Query:  RWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
        RWR +  ELTGFV+LVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  RWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG

A0A5A7VDR7 Uncharacterized protein5.6e-125100Show/hide
Query:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD
        MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD
Subjt:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD

Query:  SSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEI
        SSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEI
Subjt:  SSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEI

Query:  RWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
        RWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  RWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVSG

A0A6J1CSG5 uncharacterized protein LOC1110139081.1e-5356.32Show/hide
Query:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEP-
        MVLNGFDSV   KAI +GN++RRRKLKWLFE  VFLFL+S RS++FS A P+L HFF++++AVLNSHIFVFM F+ MLFVVYSLS LT+ K  SNR++  
Subjt:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEP-

Query:  --------DSSESLVAPPVD-----VSVEEKSTEEMPVIEDSIAEAPAEE--TTELVITAVDDTAVLPPSSPVRHLNAEMEAA-EIIPEEKRYRRTESER
                +S ESLVAP  D     + V EK+    PV   +IA  PA E  T ++   +       PP  P  +  +  EAA EIIPE K+YRRTESER
Subjt:  --------DSSESLVAPPVD-----VSVEEKSTEEMPVIEDSIAEAPAEE--TTELVITAVDDTAVLPPSSPVRHLNAEMEAA-EIIPEEKRYRRTESER

Query:  FEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVS
        F E RE++KFRRSKTEIR R ++ E   FV  V EMDI+DFNRTVESFIAEQK+HIG  +S
Subjt:  FEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVS

A0A6J1KQJ8 uncharacterized protein LOC1114963008.2e-6057.46Show/hide
Query:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD
        MVLNGFDSV   KAIS+ N  RRRKLKWLFEF +FLFLV +RSS FSLAGP   HFF+RIL VLNSH FVF+VFHAMLFVVYSLSHLTDN SGSNRTE +
Subjt:  MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPD

Query:  SS--------------ESLVAPPVD-----VSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDD-----TAVLPPSSPVRHLNAEMEAAEIIPEEKRY
        SS              ES++A   D     + V++K+T  +  +   + ++ AE+ TE    + D      T    P SPV HL        IIPE ++Y
Subjt:  SS--------------ESLVAPPVD-----VSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDD-----TAVLPPSSPVRHLNAEMEAAEIIPEEKRY

Query:  RRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVS
        RRTESERFE+NREK+K RRSKTEIR R  + E     D V+EMDIDDFNR VESFIAEQK+HIGGR+S
Subjt:  RRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIGGRVS

A0A6P3YRJ9 uncharacterized protein LOC1074036852.4e-1131.37Show/hide
Query:  FDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLS-------HLTDNKSG-----
        FD VKA KAI++  Y  RRKLKWLFE    LF ++  +++  +A      F ++++AV  SH+FVF++F+ ++F++Y+LS       HL+ + SG     
Subjt:  FDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLS-------HLTDNKSG-----

Query:  --------SNRTEPDSSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFE
                S R    S     AP  +V  E+K      +  +++A  P++          D       +S VR  +A           K YRRT+SE F 
Subjt:  --------SNRTEPDSSESLVAPPVDVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFE

Query:  ----ENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQK
            E  ++ +F+RS TEI         +  VD  D+M  D+FN  +E+FIA  K
Subjt:  ----ENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCAATGGATTCGATTCCGTCAAGGCCTTGAAGGCTATTTCCATCGGGAATTACAGCCGCCGCCGCAAGCTCAAATGGTTATTCGAGTTTTTCGTCTTCTTGTT
CCTTGTTTCCAACCGCTCTAGTTTCTTTTCTCTCGCCGGTCCGATCCTCCACCATTTTTTCCAGCGAATCCTCGCCGTCCTCAACAGTCATATCTTCGTTTTCATGGTTT
TCCACGCTATGCTCTTCGTCGTTTACTCTCTCTCCCATTTGACCGACAACAAATCCGGTTCGAACCGGACCGAACCCGATTCGTCCGAGAGTTTGGTAGCTCCGCCGGTT
GACGTCTCCGTCGAGGAGAAGAGCACGGAGGAGATGCCGGTTATTGAAGACTCAATCGCCGAAGCTCCGGCGGAGGAGACGACGGAGCTGGTAATCACTGCGGTGGATGA
TACGGCGGTGTTGCCGCCGTCCTCTCCAGTCCGGCATTTGAACGCTGAGATGGAAGCGGCGGAGATTATACCGGAGGAAAAACGGTACCGGAGGACGGAATCGGAGAGAT
TCGAGGAGAATCGGGAAAAGAGCAAGTTCAGGAGATCGAAGACGGAGATTAGGTGGAGAAATACCACCGCAGAACTGACAGGATTTGTGGATTTGGTGGATGAGATGGAC
ATCGACGATTTCAATCGGACGGTGGAGAGCTTTATAGCGGAACAGAAAATGCACATCGGGGGAAGGGTTTCCGGCTAA
mRNA sequenceShow/hide mRNA sequence
CATTTCTTCTTCTTCTTAAGAAATTTCCCAAGAATGGTTCTCAATGGATTCGATTCCGTCAAGGCCTTGAAGGCTATTTCCATCGGGAATTACAGCCGCCGCCGCAAGCT
CAAATGGTTATTCGAGTTTTTCGTCTTCTTGTTCCTTGTTTCCAACCGCTCTAGTTTCTTTTCTCTCGCCGGTCCGATCCTCCACCATTTTTTCCAGCGAATCCTCGCCG
TCCTCAACAGTCATATCTTCGTTTTCATGGTTTTCCACGCTATGCTCTTCGTCGTTTACTCTCTCTCCCATTTGACCGACAACAAATCCGGTTCGAACCGGACCGAACCC
GATTCGTCCGAGAGTTTGGTAGCTCCGCCGGTTGACGTCTCCGTCGAGGAGAAGAGCACGGAGGAGATGCCGGTTATTGAAGACTCAATCGCCGAAGCTCCGGCGGAGGA
GACGACGGAGCTGGTAATCACTGCGGTGGATGATACGGCGGTGTTGCCGCCGTCCTCTCCAGTCCGGCATTTGAACGCTGAGATGGAAGCGGCGGAGATTATACCGGAGG
AAAAACGGTACCGGAGGACGGAATCGGAGAGATTCGAGGAGAATCGGGAAAAGAGCAAGTTCAGGAGATCGAAGACGGAGATTAGGTGGAGAAATACCACCGCAGAACTG
ACAGGATTTGTGGATTTGGTGGATGAGATGGACATCGACGATTTCAATCGGACGGTGGAGAGCTTTATAGCGGAACAGAAAATGCACATCGGGGGAAGGGTTTCCGGCTA
AAAGGGGGATTCCGACAACCGAATGGAAGAATCCGAAAGGAAAGAGACACAAAGGGGGCCGAAAGGAAAAGAAAAGAAAAGGTTTCAATTGTTTTCTATTTGCAATTTAA
TGCCCCTGATTGCCGGAAATTGTAATAAAGCCATTTTACCAAAATTTTTCCAATTCTGAAATTGGAATCTTTTGGAAATTAAGGGATTTTCCTGTAATTTTTTGGATTTT
CTCTTTCATTTTCCATTTCTGGGTCGGAAATTGGATACAGAATATCAAAGAAC
Protein sequenceShow/hide protein sequence
MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRILAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPDSSESLVAPPV
DVSVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMD
IDDFNRTVESFIAEQKMHIGGRVSG