; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011971 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011971
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr04:17754307..17756045
RNA-Seq ExpressionIVF0011971
SyntenyIVF0011971
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650907.1 hypothetical protein Csa_002672, partial [Cucumis sativus]2.91e-5493.52Show/hide
Query:  PPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLASSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRV
        PPPP I  PPPSPSPPPFSP PPPPPHRHRR+PPPPLASS+ERKKKRPPVPPKNINTNQ SKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRV
Subjt:  PPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLASSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRV

Query:  KDRYEGFS
        KDRYEGFS
Subjt:  KDRYEGFS

XP_008463997.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]2.43e-94100Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLA
        MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLA
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLA

Query:  SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_011651738.2 LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus]1.94e-8492.94Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLA
        MERPLTTLIFVI+GFAFSVLSLLVESQTPD ANPTLSPP PS PPPSPSPPPPPLPPPPPPP PPP I  PPPSPSPPPFSP PPPPPHRHRR+PPPPLA
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLA

Query:  SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        SS+ERKKKRPPVPPKNINTNQ SKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_022948467.1 leucine-rich repeat extensin-like protein 3 [Cucurbita moschata]6.23e-4166.14Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPP--PRIISPPPSPSP------PPFSPSPPPP-----
        MERP +TLIFVISGFAFS+LSLLVESQ  D A P+ SPP   PPPP PSPPPP  PPPPPPPPPP  P    PPPSPSP      PP S SPPPP     
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPP--PRIISPPPSPSP------PPFSPSPPPP-----

Query:  ---PHRHRRS--PPPPLASSMERKKKRPPVPPKNINTN-QASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
           P    RS  PPPP+ +S +  KK P V   N + N + SKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KDRY+GFS
Subjt:  ---PHRHRRS--PPPPLASSMERKKKRPPVPPKNINTN-QASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_038900729.1 proline-rich receptor-like protein kinase PERK2 [Benincasa hispida]1.14e-6384.18Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPP--PPPPPPPPPRIISPPP---SPSPPPFSPSPP-PPPHRHRRS
        MERPLTTLIFVISGFAFSVLSLLVESQT D ANPTLSPP+PSPPPPSP PPPPPL P  PPPPPPPPP I+SPPP   SPSPPPFSP PP P P   RR 
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPP--PPPPPPPPPRIISPPP---SPSPPPFSPSPP-PPPHRHRRS

Query:  PPPPLASSMERKKKRPPVPPKNIN-TNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PPP  AS  E  KK PPVPPKNIN TNQ SKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PPPPLASSMERKKKRPPVPPKNIN-TNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

TrEMBL top hitse value%identityAlignment
A0A0A0LC75 Uncharacterized protein1.5e-6593.53Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLA
        MERPLTTLIFVI+GFAFSVLSLLVESQTPD ANPTLSPP PS PPPSPSPPPPPLPPPPPPPPPPP I  PPPSPSPPPFSP PPPPPHRHRR+PPPPLA
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLA

Query:  SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        SS+ERKKKRPPVPPKNINTNQ SKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A1S3CKG6 leucine-rich repeat extensin-like protein 33.8e-72100Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLA
        MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLA
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLA

Query:  SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A6J1DGD7 proline-rich receptor-like protein kinase PERK91.5e-2364.74Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPP-PSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPL
        MERPLTT IFVISGFAFS+LSLLVE Q  D  N   SP  PSPP  PSP P  P LPPP PP PP P  +SPPP PSP     SPPPP  R   SPPP  
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPP-PSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPL

Query:  ASSMERKKKR-PPVPPKNINTNQASKRS-LNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        ASS   +  +      KN   NQA KRS LNKGK+VGLFFVGIAAVLQ+CVVGFLVFKRRQLLR K++YE FS
Subjt:  ASSMERKKKR-PPVPPKNINTNQASKRS-LNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A6J1G9A4 leucine-rich repeat extensin-like protein 35.5e-3166.31Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPS------PPPFSPSPPPP-------
        MERP +TLIFVISGFAFS+LSLLVESQ  D A P+ SPP P PPPPSP PP PP PPPPPPP  PP+   PPPSPS      PPP S SPPPP       
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPS------PPPFSPSPPPP-------

Query:  -PHRHRRS--PPPPLASSMERKKKRPPVPPKNINTN-QASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
         P    RS  PPPP+ +S +  KK P V   N + N + SKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KDRY+GFS
Subjt:  -PHRHRRS--PPPPLASSMERKKKRPPVPPKNINTN-QASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A6J1KAI1 leucine-rich repeat extensin-like protein 35.2e-2961.19Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLS--PPMPSPPPPSPSPPPPPLPPP------------------PPPP-----PPPPRIISPPP--
        MERPL+T IFVISGFAFS+LSLLVESQ  D A  + S  PP PSPPPPSP PPPPPL PP                  PPPP     PPPP  + PPP  
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLS--PPMPSPPPPSPSPPPPPLPPP------------------PPPP-----PPPPRIISPPP--

Query:  SPSPPP--FSPSPPPPPHRHRRSP-PPPLASSMERKKKRPPVPPKNINTN-QASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGF
        SPS PP  F P P PP  +HR +P PPP+ +S +  KK P V   N + N + SKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KD+Y+GF
Subjt:  SPSPPP--FSPSPPPPPHRHRRSP-PPPLASSMERKKKRPPVPPKNINTN-QASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGF

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54215.1 proline-rich family protein3.5e-0946.95Show/hide
Query:  IFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRI-------ISPPPSPSPPPFSP-SPPPPPHRHRRSPPPPLA
        +F+++ F      LLV+SQ P        P  P  PPP P PPPPP PPPPPPPPPPP +       I PPP P      P S PPPP    RS PPP  
Subjt:  IFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRI-------ISPPPSPSPPPFSP-SPPPPPHRHRRSPPPPLA

Query:  SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD
              ++ PP PP+  +  +  +  LNKGK VGL FVG+ A+LQ+ VV FLVFKR+QLL +KD
Subjt:  SSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD

AT1G72600.1 hydroxyproline-rich glycoprotein family protein3.6e-0647.27Show/hide
Query:  PPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLASSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRR
        PPPPPPPPP  +SPPPSP     S       H HRR           R  K PP PP         K+ +N GK VGLFF G+AA LQ+ V  FL+FKRR
Subjt:  PPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLASSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRR

Query:  Q-LLRVKDRY
        Q LL++ DR+
Subjt:  Q-LLRVKDRY

AT1G72600.2 hydroxyproline-rich glycoprotein family protein3.6e-0647.27Show/hide
Query:  PPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLASSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRR
        PPPPPPPPP  +SPPPSP     S       H HRR           R  K PP PP         K+ +N GK VGLFF G+AA LQ+ V  FL+FKRR
Subjt:  PPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLASSMERKKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRR

Query:  Q-LLRVKDRY
        Q LL++ DR+
Subjt:  Q-LLRVKDRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCCAGATGAAGCCAATCCCACTCTCTC
GCCGCCGATGCCTTCTCCACCGCCTCCCTCTCCCTCTCCACCACCACCACCGTTGCCACCACCTCCCCCACCACCCCCGCCTCCGCCCCGAATCATCTCACCGCCTCCAT
CGCCATCTCCACCCCCATTTTCCCCATCGCCTCCTCCGCCGCCGCATCGCCATCGTCGTAGTCCACCGCCCCCTCTTGCATCATCCATGGAGAGAAAGAAAAAACGACCA
CCAGTCCCTCCGAAAAACATTAATACTAATCAAGCGTCGAAGCGAAGTCTCAATAAGGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTG
TGTGGTGGGTTTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAGGATCGATATGAAGGATTTTCATGA
mRNA sequenceShow/hide mRNA sequence
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCCCAATCCATTTTTTGTTTTTTTTAATTTTGAATTTTTCTTCTTCTTCTTCTTCTTCTTATTATTATTATATCTCA
CAACAAAGCTTAGATCATCACTGTGACTCAGTCAATCTTACATTTGACTCAGTTTCCTCATCCTTCTTCTTCTCTTTCTTTCTCAGCCATCAATTTTCACCCCCTCCATT
TCCTCCTCCTTCTTATGCTCTTCTTTTTCCCCTTTGCCAAACCCTCACATTGAGGAAGCCCCAGATTCCGAGGCCATCCCAATGTCCTCTGCAGATTTCTTCTTCTTTTT
TCATTCTAATCTTTTCTTCTGCGGATTTTGATTTTGGGTTCTTTTTTTTTTCCTCTTCTTTTGTGGATGCGGAATTTGGGGCACATTATAACCGGGTGTTTTTTTTCTTT
CTTTTTTTGAGTTTTCTCAAACCCTAGCGTTTTCAATTTGCTTCCGACTCTTTGTGGGTGTTGACGATTGTTATTTGGATTTCGAGGCTTCGAAAGAGGATTTTGAGCCT
TTGGGAACCAACCCTTTTGGGAGAAACGTCGGCTATTGTTTCATTTCAATCACAGGGTTGGGTTGTTCTCTGTTTTTGGTTAAATCCAGATGCGAGGAAGGTCCGGGGAT
TTTGAAAGTGAATCCTGATTTTCTTGGATTACTGTTTTTTTCAATGCAATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTC
GCTTCTTGTCGAGTCTCAGACTCCAGATGAAGCCAATCCCACTCTCTCGCCGCCGATGCCTTCTCCACCGCCTCCCTCTCCCTCTCCACCACCACCACCGTTGCCACCAC
CTCCCCCACCACCCCCGCCTCCGCCCCGAATCATCTCACCGCCTCCATCGCCATCTCCACCCCCATTTTCCCCATCGCCTCCTCCGCCGCCGCATCGCCATCGTCGTAGT
CCACCGCCCCCTCTTGCATCATCCATGGAGAGAAAGAAAAAACGACCACCAGTCCCTCCGAAAAACATTAATACTAATCAAGCGTCGAAGCGAAGTCTCAATAAGGGGAA
GAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGTTTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAGGATCGATATGAAG
GATTTTCATGAAGCCATTGGCATCTGTTTCCTTCATCTTACAACAGAGCCGAGGACTGTAGAAGTATTCTTGAGGATGTGGCGGCCATTGAGCTAACTGGATTGTGTCAC
CTGCTCCAGAAAAAGCCAACAATTTGGGTAAATTTCGATTCTTGGATTGAGAAGATTAACAAAGCTTGTTCTTGAGATTATAAGAGGCTGCACATCAGGTGATAAACTGA
ACAGGCAGCGGGCGGATAGGAAGGACGAACATTCTTCTCTAGGGCTTTCCTCAGGTGTTGTGTAAAAATGGGTACATGATATTTGATTGAGCTTTTTCTCCATGTGATTT
TTCAATTCTTGTTCATTCTTTTGTCCAATTCTGATTATACAGTTTATTAATTCAAACCAGAAGAAATCGTCTTAAAATACCCCATTTTCTTGTGAATTATTTATCTTCGA
ACCTCTGTTATGGCTGTAAAAGATTGTCTTTGCCTAATATCCACAAAACTAATTACGCACTGAGCCTCTACTCTCTTTCTCCGAGTATG
Protein sequenceShow/hide protein sequence
MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPSPPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLASSMERKKKRP
PVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS