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IVF0011976 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011976
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr04:9813739..9813969
RNA-Seq ExpressionIVF0011976
SyntenyIVF0011976
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]2.26e-1168.18Show/hide
Query:  ERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAER
        ++ SSKDM N CKEKFGD+L+  +ITSI CV KGEQVWV G ER
Subjt:  ERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAER

KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.84e-1357.63Show/hide
Query:  LLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK
        L+ER SSKD+ N C+E+FGD LHF +ITSI C  +  QVW +GAER   L EK+Y  YK
Subjt:  LLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK

KAA0051792.1 hypothetical protein E6C27_scaffold60G002010 [Cucumis melo var. makuwa]6.00e-0674.19Show/hide
Query:  MTNGCKEKFGDKLHFDEITSITCVLKGEQVW
        M N  KE+FGDKLH   ITSI CVLKGEQVW
Subjt:  MTNGCKEKFGDKLHFDEITSITCVLKGEQVW

TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]5.23e-2778.79Show/hide
Query:  MASACRQLLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK
        MA ACRQLLER++SKDM N CKE+F   LH DEITSITCV KGEQVWVL AER  PLKEKYYKSYK
Subjt:  MASACRQLLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK

TYK21449.1 hypothetical protein E5676_scaffold609G001190 [Cucumis melo var. makuwa]4.89e-0674.19Show/hide
Query:  MTNGCKEKFGDKLHFDEITSITCVLKGEQVW
        M N  KE+FGDKLH   ITSI CVLKGEQVW
Subjt:  MTNGCKEKFGDKLHFDEITSITCVLKGEQVW

TrEMBL top hitse value%identityAlignment
A0A5D3C951 Uncharacterized protein2.0e-2078.79Show/hide
Query:  MASACRQLLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK
        MA ACRQLLER++SKDM N CKE+F   LH DEITSITCV KGEQVWVL AER  PLKEKYYKSYK
Subjt:  MASACRQLLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK

A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein1.6e-0957.63Show/hide
Query:  LLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK
        L+ER SSKD+ N C+E+FGD LHF +ITSI C  +  QVW +GAER   L EK+Y  YK
Subjt:  LLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK

A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein1.0e-0868.18Show/hide
Query:  ERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAER
        ++ SSKDM N CKEKFGD+L+  +ITSI CV KGEQVWV G ER
Subjt:  ERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGTGCTTGTCGCCAACTACTCGAGAGACTAAGTAGCAAGGACATGACTAACGGGTGCAAAGAGAAGTTTGGAGATAAACTCCACTTTGACGAGATAACTTCTAT
CACTTGTGTCTTGAAAGGAGAACAAGTGTGGGTACTTGGTGCCGAGAGGTTTTCACCCTTAAAAGAGAAGTACTATAAGTCTTATAAGACTCTTAGATTTATATTGCTTA
ATGAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGTGCTTGTCGCCAACTACTCGAGAGACTAAGTAGCAAGGACATGACTAACGGGTGCAAAGAGAAGTTTGGAGATAAACTCCACTTTGACGAGATAACTTCTAT
CACTTGTGTCTTGAAAGGAGAACAAGTGTGGGTACTTGGTGCCGAGAGGTTTTCACCCTTAAAAGAGAAGTACTATAAGTCTTATAAGACTCTTAGATTTATATTGCTTA
ATGAAGCTTAG
Protein sequenceShow/hide protein sequence
MASACRQLLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYKTLRFILLNEA