CuGenDBv2

Gene ID	IVF0011992
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Period circadian protein
Genome location	chr01:4306102..4309583
RNA-Seq Expression	IVF0011992
Synteny	IVF0011992
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0059265.1 uncharacterized protein E6C27_scaffold430G002000 [Cucumis melo var. makuwa]

1.55e-159

98.72

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
        SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EEIQILNEMGELLANSLPLSFSREGIVWNPK+  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

KAG7011844.1 hypothetical protein SDJN02_26750 [Cucurbita argyrosperma subsp. argyrosperma]

5.54e-137

85.11

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MKLAPKVIFL+RDSE F+SA+ GALR NPP TVTTLDE FEFSLE+YA+KDQKASG +VHYLDDKGIYQVSVLILQ+YEPPVLACA+DVVLSHIAG+R P
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
        SSSK+KPTLVVPS+ITSSKLKWESKT TK+DRTVLLYGT+VGPETDIS+TMGAKV+KLPS SQIY EQLACL+HLI IL IPAFFVVG TGRSLSNQAAG
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EEIQIL+EMGELLANSL L FSREGIVWNPK+  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

XP_004144560.1 uncharacterized protein LOC101217042 [Cucumis sativus]

2.36e-154

94.89

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MKLAPKVIFLLRDSE FASALSGALRL+PPSTVTTLDE FEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
        SSSKAKPT+VVPS+ITSSKLKWESKTLTKNDRTVLLYGT+VGPETDIS+TMGAKVKKLPS SQIYYEQLACLYHLIHIL IPAFFVVGLTGRSLSNQAAG
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EEIQILNEMGELLANSLPLSFSREGIVWNPK+  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

XP_008462021.1 PREDICTED: uncharacterized protein LOC103500492 [Cucumis melo]

6.31e-159

98.3

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MKLAPKVIFLLRDSE FASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
        SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EEIQILNEMGELLANSLPLSFSREGIVWNPK+  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

XP_038886868.1 uncharacterized protein LOC120077082 [Benincasa hispida]

2.38e-140

87.66

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MKLAPKVIFL+RDS+ FASA+SGALR NPP TVTTLDE FEFSLEDYAIKDQKASG IVHYLDDKGIYQVSVLILQ+Y+PPVLACALDVVLSHIAGER P
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
         SS+AKPTLVVPS+ITSSKLKWES TLTKNDRTVL YGT+VGPETDIS+TMGAKVKKLPS+SQI+YEQLACLYHLIHIL I AFFVVG TG SLSNQAAG
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EEIQI NEMGELL+NSLPLSFSREGIVWNPK+  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K119 Uncharacterized protein

2.6e-119

94.89

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MKLAPKVIFLLRDSE FASALSGALRL+PPSTVTTLDE FEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
        SSSKAKPT+VVPS+ITSSKLKWESKTLTKNDRTVLLYGT+VGPETDIS+TMGAKVKKLPS SQIYYEQLACLYHLIHIL IPAFFVVGLTGRSLSNQAAG
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EEIQILNEMGELLANSLPLSFSREGIVWNPK+  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

A0A1S3CGG9 uncharacterized protein LOC103500492

8.6e-123

98.3

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MKLAPKVIFLLRDSE FASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
        SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EEIQILNEMGELLANSLPLSFSREGIVWNPK+  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

A0A5A7V086 Uncharacterized protein

2.9e-123

98.72

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
        SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EEIQILNEMGELLANSLPLSFSREGIVWNPK+  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

A0A6J1GLD7 uncharacterized protein LOC111455326

1.2e-105

84.68

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MKLAPKVIFL+RDSE F+SA+ GALR NPP TVTTLDE FEFSLE+YAIKD KASG++VHYLDDKGIYQVSVLILQ+YEPPVLACA+DVVLSHIAG+RSP
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
        SS K+KPTLVVPS+ITSSKLKWESKT TK+DRTVLLYGT+VGPETDIS+TMGAKV+KLPS SQIY EQLACL+HLI IL IPAFFVVG TGRSLSNQAAG
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EEIQI++EMGELLANSL L FSREGIVWNPK+  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

A0A6J1I0E5 uncharacterized protein LOC111468298

1.5e-103

84.26

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MKLAPKVIFL+R+SE F+SA+ GALR NPP TVTTL E FEFSLE+YAIKD KASG+IVHYLDDKGIYQVSVLILQ+YEPPVLACA+DVVLSHIAG+R P
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
        SSSK+KPTLVVPSIITSSKLKWESKT T +DRTVLLYGT+VGPETDIS+TMGAKV+KLPS SQIY EQLACL+HLI IL IPAFFVVG T RSLSNQAAG
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EEIQIL+EMGELLANSL L FSREGIVWNPK+  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G07640.1 unknown protein

4.9e-46

37.45

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Query:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP
        MK+A K++FL  DS+ FA+ +S  L  +P S +  L+E  +  L+ Y ++  +  G+IVH++D+  +YQVS+ +L++YEPPVL CA++ +L  I      
Subjt:  MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSP

Query:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG
          S   PT++ P  + +SKLK+ +++L  N+R   L+  QV  ET+ S+   ++++K P + QI+YE L+CL HL  + ++P   ++G    SL+++A  
Subjt:  SSSKAKPTLVVPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAG

Query:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK
        EE+Q+++E GEL+A+   LSFSR+ I W+  K  K
Subjt:  EEIQILNEMGELLANSLPLSFSREGIVWNPKKHQK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAATTAGCTCCAAAAGTAATATTTCTCCTCAGAGATTCTGAGAGTTTTGCCTCAGCCCTTTCCGGAGCTCTTCGCCTCAACCCTCCTTCCACGGTCACCACGCTGGA
TGAAATTTTCGAGTTCTCCCTCGAGGATTATGCAATCAAGGACCAGAAGGCCTCCGGTAACATCGTTCATTATCTTGATGATAAGGGAATTTATCAGGTTTCAGTATTAA
TCTTACAAAATTACGAACCTCCAGTCTTGGCGTGTGCTTTAGATGTAGTTCTTTCACACATAGCAGGAGAACGTTCACCCTCTTCTTCTAAAGCGAAACCCACTCTTGTA
GTCCCATCTATCATTACATCCTCAAAGCTCAAGTGGGAGAGCAAAACTCTCACCAAAAATGATCGGACTGTTCTTCTGTATGGTACCCAAGTAGGTCCAGAAACAGATAT
TTCTCAAACGATGGGTGCCAAAGTCAAGAAACTACCATCAGCTTCACAGATCTACTACGAGCAACTAGCCTGTTTATATCACTTGATTCACATCTTGAAGATTCCTGCTT
TTTTCGTTGTTGGACTAACAGGTCGTAGTCTTTCCAATCAAGCTGCAGGTGAAGAGATTCAGATACTGAATGAAATGGGTGAACTTTTAGCAAACTCCTTGCCACTCAGC
TTCTCAAGAGAAGGAATTGTTTGGAATCCAAAGAAACATCAAAAGATGTAA

mRNA sequence

Show/hide mRNA sequence

CGAGAAAGAAGCCCACCGAAGCTCGAGAGACCGATTAGAGCAAAAGAACGAAGCTAAAATAAAACCAAATAAGGTTTTTGAGATTCCATCTTCTACGCCGGCGATCCGCC
ATTTCAGAGTTGGGATAGCTCGGAACTCAGACAATGAAATTAGCTCCAAAAGTAATATTTCTCCTCAGAGATTCTGAGAGTTTTGCCTCAGCCCTTTCCGGAGCTCTTCG
CCTCAACCCTCCTTCCACGGTCACCACGCTGGATGAAATTTTCGAGTTCTCCCTCGAGGATTATGCAATCAAGGACCAGAAGGCCTCCGGTAACATCGTTCATTATCTTG
ATGATAAGGGAATTTATCAGGTTTCAGTATTAATCTTACAAAATTACGAACCTCCAGTCTTGGCGTGTGCTTTAGATGTAGTTCTTTCACACATAGCAGGAGAACGTTCA
CCCTCTTCTTCTAAAGCGAAACCCACTCTTGTAGTCCCATCTATCATTACATCCTCAAAGCTCAAGTGGGAGAGCAAAACTCTCACCAAAAATGATCGGACTGTTCTTCT
GTATGGTACCCAAGTAGGTCCAGAAACAGATATTTCTCAAACGATGGGTGCCAAAGTCAAGAAACTACCATCAGCTTCACAGATCTACTACGAGCAACTAGCCTGTTTAT
ATCACTTGATTCACATCTTGAAGATTCCTGCTTTTTTCGTTGTTGGACTAACAGGTCGTAGTCTTTCCAATCAAGCTGCAGGTGAAGAGATTCAGATACTGAATGAAATG
GGTGAACTTTTAGCAAACTCCTTGCCACTCAGCTTCTCAAGAGAAGGAATTGTTTGGAATCCAAAGAAACATCAAAAGATGTAAAGGAACCATGGCGTGCGTTATATGGA
TGATGGTTTGGTCTTTTTTGCTACCTTTTATTTTAGTTCATCTGGCAAACTAGGGTTATTTTGTAATCCCATATGTCAAAAATACAATTATTAAAATTTTAAATTTTGTT
AAGAAGAATCTTAGTTTAGATTTCTTCTTGTTTATAATCATCAGAAGAAACAAAATATGCTTGCTTAAAATATTGTTTACAATTTTTCTATTAATTTGTTTGGATGTATT
TGGATGATAGTTATCAGACCGATGAAACTAATTACAATTTATTAAAATAATAGACATTTAAGGATTAAA

Protein sequence

Show/hide protein sequence

MKLAPKVIFLLRDSESFASALSGALRLNPPSTVTTLDEIFEFSLEDYAIKDQKASGNIVHYLDDKGIYQVSVLILQNYEPPVLACALDVVLSHIAGERSPSSSKAKPTLV
VPSIITSSKLKWESKTLTKNDRTVLLYGTQVGPETDISQTMGAKVKKLPSASQIYYEQLACLYHLIHILKIPAFFVVGLTGRSLSNQAAGEEIQILNEMGELLANSLPLS
FSREGIVWNPKKHQKM

IVF0011992 (gene) of Melon (IVF77) v1 genome